Tk10846, Tk10846 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10846
Unique NameTk10846
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length234
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 206..230
e-value: 5.1
score: 15.9
coord: 99..119
e-value: 28.0
score: 9.3
coord: 150..174
e-value: 0.42
score: 19.7
coord: 25..49
e-value: 3.1E-4
score: 30.1
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 25..54
score: 8.85
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 147..181
e-value: 0.8
score: 13.0
coord: 22..56
e-value: 0.85
score: 12.8
NoneNo IPR availablePFAMPF12874zf-metcoord: 25..49
e-value: 1.9E-5
score: 24.8
NoneNo IPR availableGENE3D3.30.160.60coord: 23..49
e-value: 1.8E-8
score: 35.9
NoneNo IPR availableGENE3D3.30.160.60coord: 95..189
e-value: 9.1E-6
score: 27.7
NoneNo IPR availablePANTHERPTHR24208FAMILY NOT NAMEDcoord: 1..121
coord: 119..232
NoneNo IPR availablePANTHERPTHR24208:SF84ZINC FINGER HOMEOBOX PROTEIN 3coord: 1..121
coord: 119..232
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 16..55

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1485_size38829-snap-gene-0.6-mRNA-1maker-scaffold1485_size38829-snap-gene-0.6-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10846 ID=Tk10846|Name=Tk10846|organism=Tigriopus kingsejongensis|type=polypeptide|length=234bp
MYCITGQNHPRLARGETYTCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHL
NNMQELQNGTSISSVTGRSNILHPTASSMARSIGSNTGLNGLIRPKSSWR
CEVCNYETSVARNLRIHMTTDDTELLSNHLSQDRSKGREQEVSMMITGNF
ICKLCNYKTTLKANFQLHSKTDKHLQRLNHFNHIKEGGQGNEWQLKTLNV
SNPVKIRCNACDYVTYSLHKLQLHTTDQKHKAFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
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