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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR004240 | Nonaspanin (TM9SF) | PFAM | PF02990 | EMP70 | coord: 67..627
e-value: 8.2E-207
score: 687.8 |
| IPR004240 | Nonaspanin (TM9SF) | PANTHER | PTHR10766 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN | coord: 24..671 |
| None | No IPR available | PANTHER | PTHR10766:SF36 | TRANSMEMBRANE 9 SUPERFAMILY MEMBER 2 | coord: 24..671 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 632..661 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 556..560 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 405..430 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..11 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 561..589 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 332..371 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 372..399 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 12..23 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 532..555 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 502..531 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 29..308 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 400..404 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 590..600 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 472..501 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 467..471 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 442..466 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 621..631 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 601..620 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 309..331 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 662..671 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 24..28 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..28 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 431..441 |
| None | No IPR available | TMHMM | TMhelix | | coord: 479..501 |
| None | No IPR available | TMHMM | TMhelix | | coord: 639..661 |
| None | No IPR available | TMHMM | TMhelix | | coord: 309..331 |
| None | No IPR available | TMHMM | TMhelix | | coord: 372..394 |
| None | No IPR available | TMHMM | TMhelix | | coord: 404..426 |
| None | No IPR available | TMHMM | TMhelix | | coord: 565..587 |
| None | No IPR available | TMHMM | TMhelix | | coord: 442..464 |
| None | No IPR available | TMHMM | TMhelix | | coord: 528..550 |
| None | No IPR available | TMHMM | TMhelix | | coord: 600..619 |
| None | No IPR available | TMHMM | TMhelix | | coord: 13..35 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10853 ID=Tk10853|Name=Tk10853|organism=Tigriopus kingsejongensis|type=polypeptide|length=671bp
MAKFRLDPGRGTWSLVLFCGGLFGVAQAFYLPGLAPVTYCEYPEPGKCQS
DIKLYVNRLNSEESVIPYEYDHFDFCRADSSSGPSENLGQVVFGERIRPS
PYQIFFNKDSDKCRTVCTKSYDLRNADGQKKLTQLRKGMSMNYQHHWIVD
NMPVTWCYPVESGQKYCATGFPMGCYVDKQGNPKDACVISREYTKPDHFY
IFNHVDIEIAYHPGNNEDWGKYLSDQIGGRIVAVKLSPRSVDHGSNPASD
CSASLQSNPPLAIPAKGDNTGKQVITYSYTVKFTPRSDVKWSSRWDYILE
SMPHTNIQWFSILNSLVIVLFLSGMVAMILLRTLHKDIARYNQIDSGEDA
QEEFGWKLVHGDVFRPPRKGMLLAVFLGSGTQILAMSAITLIFACLGFLS
PANRGALMTCALVLYVCLGTPAGYVSARIYKSFGGEKWKSNVLLTSMLCP
GVVFCHFFIMNLVLWYKDSSAAIPFFTLVALLALWFGVSVPLTFVGAFFG
FRKRALEHPVRTNQIPRQIPEQSVYTQAIPGIIMGGVLPFGCIFIQLFFV
LNSIWSSQIYYMYGFLFLVFIILVITCSETTILLCYFHLCAEDYHWWWRG
FLTSGFTAFYLGVYCIHYFMTKLEIEGAASTFLYFGYTSIMVFLFFLLSG
TIGFFACFWFVRKIYSVVKVD back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR004240 | EMP70 |
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0016021 | integral component of membrane |
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