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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000620 | EamA domain | PFAM | PF00892 | EamA | coord: 637..775
e-value: 7.4E-9
score: 35.8
coord: 195..334
e-value: 3.0E-14
score: 53.3
coord: 466..602
e-value: 1.5E-9
score: 38.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 416..438 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 416..447 |
| None | No IPR available | PANTHER | PTHR22911 | ACYL-MALONYL CONDENSING ENZYME-RELATED | coord: 464..774
coord: 136..333 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 615..633 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 704..723 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 556..560 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 225..243 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 282..292 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 532..555 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 145..165 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 724..734 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 336..465 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 312..316 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 466..486 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 666..684 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 139..144 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 61..80 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 166..190 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 244..262 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 121..138 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 317..335 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 498..520 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 777..780 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 685..703 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 487..497 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 92..109 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 754..758 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 191..213 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 81..91 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 263..281 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 110..120 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 634..654 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 521..531 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 759..776 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 581..591 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 214..224 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..60 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 293..311 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 735..753 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 655..665 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 561..580 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 592..614 |
| None | No IPR available | SUPERFAMILY | 103481 | Multidrug resistance efflux transporter EmrE | coord: 500..605 |
| None | No IPR available | SUPERFAMILY | 103481 | Multidrug resistance efflux transporter EmrE | coord: 699..776 |
| None | No IPR available | SUPERFAMILY | 103481 | Multidrug resistance efflux transporter EmrE | coord: 261..337 |
| None | No IPR available | TMHMM | TMhelix | | coord: 221..243 |
| None | No IPR available | TMHMM | TMhelix | | coord: 292..311 |
| None | No IPR available | TMHMM | TMhelix | | coord: 317..339 |
| None | No IPR available | TMHMM | TMhelix | | coord: 62..81 |
| None | No IPR available | TMHMM | TMhelix | | coord: 263..280 |
| None | No IPR available | TMHMM | TMhelix | | coord: 704..726 |
| None | No IPR available | TMHMM | TMhelix | | coord: 662..684 |
| None | No IPR available | TMHMM | TMhelix | | coord: 733..752 |
| None | No IPR available | TMHMM | TMhelix | | coord: 560..579 |
| None | No IPR available | TMHMM | TMhelix | | coord: 633..655 |
| None | No IPR available | TMHMM | TMhelix | | coord: 192..214 |
| None | No IPR available | TMHMM | TMhelix | | coord: 140..159 |
| None | No IPR available | TMHMM | TMhelix | | coord: 591..613 |
| None | No IPR available | TMHMM | TMhelix | | coord: 533..555 |
| None | No IPR available | TMHMM | TMhelix | | coord: 466..488 |
| None | No IPR available | TMHMM | TMhelix | | coord: 498..520 |
| None | No IPR available | TMHMM | TMhelix | | coord: 91..113 |
| None | No IPR available | TMHMM | TMhelix | | coord: 757..776 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10856 ID=Tk10856|Name=Tk10856|organism=Tigriopus kingsejongensis|type=polypeptide|length=780bp
MAMTCSETVITCQLHRQDELEQNGYRAIPDSESEPPPIEVEVPVGFLTPG
WLTARPRFQTAWGLSLALISGLIFTFNGSLLKTYQIDPVDAMTVRGVVQC
LIMGLIVWARGLSLWPSHASRLVRGFVLLQGFIGSLMHRLGLWKLIFIGC
LLVGIIFVIQPPVLFPERPTNETHYLLEGDASEAGGMAHDFHYYIGALLA
LASSILGSINNVCVSGALKQINSMILVFYTGLFCCVIALLATLFDHKQRI
YSADIALIEPGDWAILFTMAGLGILAYFSVIKALQLVDPTQVSVLRSVEI
IFAFGVQVFIMNQHPDVFSVLGSSLVLTAIVLIAFEGPIITHAPSCLPRP
TPAPILLDKFDVSMIVPVLPDELSIHDLWRLLPVAWKSRYSCLRHPNSLE
LGITWAVLKSSSSMSGPSQGINGGHGSVTCSDPDRSQYQPLPPTVPSPDQ
PRIFRFLGNHPTLRNLLGLILALFSGVIFTASSFLIQWCHVDFVEAALVR
SVLQTLVMVILTKFLGQSVWPSDEVASALEKTYLIVQGLVGGAMTLLGYA
AIAMIPLGDALTLFFASPLFAAVFGHILLGHRLKLWKMSFSVLLLCGVTF
VVRPPMIFPVSHPYAFRRRRSPHGIGSLPHDDAYFFGSGLALLGALLGGV
YSVLSSGPLRRLNSQISILYVGVFTFLLAIFATEVDHKQRIFTPFIANIS
AQEWGHLIAIASLGIVAYFSVFLSLQLVDGTIVSILRSSEIVLAFLAQSF
LLHETPSQMGIFGASLVLISVVMISLEATI back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000620 | EamA_dom |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
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