Tk10857, Tk10857 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10857
Unique NameTk10857
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1013
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 844..905
NoneNo IPR availableCOILSCoilCoilcoord: 942..963
NoneNo IPR availablePFAMPF14559TPR_19coord: 706..762
e-value: 8.6E-8
score: 32.5
coord: 187..238
e-value: 3.6E-6
score: 27.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 936..997
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 892..929
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 892..1013
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 176..419
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 172..205
e-value: 0.0012
score: 28.1
coord: 460..493
e-value: 4.3
score: 16.3
coord: 731..764
e-value: 0.067
score: 22.3
coord: 511..544
e-value: 1.4
score: 17.9
coord: 207..240
e-value: 0.0015
score: 27.8
coord: 421..453
e-value: 480.0
score: 0.2
coord: 545..578
e-value: 0.49
score: 19.4
coord: 579..612
e-value: 300.0
score: 2.0
coord: 315..348
e-value: 0.052
score: 22.7
coord: 695..728
e-value: 0.028
score: 23.6
coord: 350..383
e-value: 3.4E-5
score: 33.3
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 315..344
e-value: 0.17
score: 12.1
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 545..578
score: 7.995
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 731..764
score: 8.172
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 460..493
score: 6.962
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 350..383
score: 11.859
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 579..612
score: 5.723
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 207..240
score: 8.644
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 511..544
score: 5.782
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 695..728
score: 8.142
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 315..348
score: 7.434
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 172..205
score: 8.024
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 353..383
e-value: 3.8E-6
score: 26.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 507..860
e-value: 4.9E-40
score: 139.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 58..309
e-value: 5.4E-23
score: 83.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 310..500
e-value: 1.9E-27
score: 98.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 401..489
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 41..241
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 511..592
coord: 641..777
coord: 353..383
IPR031101RNA polymerase-associated protein Ctr9PANTHERPTHR14027TPR REPEAT NUCLEAR PHOSPHOPROTEIN/CTR9coord: 9..1011
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 172..764
score: 48.571

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold592_size129239-snap-gene-0.23-mRNA-1maker-scaffold592_size129239-snap-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10857 ID=Tk10857|Name=Tk10857|organism=Tigriopus kingsejongensis|type=polypeptide|length=1013bp
MSAAEVPPITGSVEIPLLGSEAEVIEIAFNELPQAEEVVNILSAESAPLH
IWVALAVEYYRQNREEEFVQILETSRSDANLDYDKSEEDQMRQLDTLAAF
YVQKANAEKKQEKKRELFTKATLLYTTADKIIMYNTKHLLGRAFFCLYEG
DKMEQANAQFDFVLNQENQSNIPSLLGKACIHFNKKEYKTALAFYKKALR
TNPQCPANVRLGMGHCYWKLGNERKARAAFGRALELDAGCVGALVGLAIL
DLNTQKKDAIHEGVKKLSKAYTIDATNPMVLNHLANHFFFKKDYNKVQHL
ALHAFHNTENEAMRAESCYQLARAFHVQNDYGQAFQYYYQATQFASPNFV
LPHYGLGQMYIYRGDHENAAQCFEKVLKAQPNNYETMKILGSLYANSDNE
EKRQIARNHLKKVTDQFPDDIEGWIELAQILEQSDQTASLAAYKTATKIL
KDNVQTDIPPEILNNVGSIQFRLGNMPEANICFESALEHCQREQQQEEEG
TEDTYFKQISITIRYNLARILESLCQHDKAERLYKDILMECPNYIDCYLR
LGCMLRDRGQIYEASDKFKDALQISNEHPDAWSLIGNLHLTKMEWGPGQK
KFERILNQPSSNSDAYSHIALGNIWLQTLHQPTKDKDKEKKYQERALAMY
KQVLRNDPKNIWAANGIGAVLAHKGYINEARVIFAEVREATADYCDVWLN
IAHIYVEQNQYVAAIQMYENALKKFFKHHSVDVLLYLARAYAKNGQLKEA
KMTLLKARRVAPHDTVILYNIALILQKLASQLLRDEKSTLEEVLQAVHEL
GLSHKYFQYLAVEGDRMKYDLARAAIEARQCQDLLSQAQYHVARARKIDE
EERALRKKQQEEREKFQEKQLREQKRLEEERRNKLEELAKARNEYKEKMK
GATHIEDMPEPTKKSGGGKRRRDDDIISSSEGEGGPEGRPTKEERQRRKE
ERKREKKERKERKSGDKRKRRTKGEGEDATRGKKESVDDDKGLKKKKIVS
KAMVSSSSEGDSN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR013105TPR_2
IPR011990TPR-like_helical_dom_sf
IPR031101Ctr9
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0016570histone modification
Add to Basket