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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001478 | PDZ domain | SMART | SM00228 | pdz_new | coord: 769..847
e-value: 9.0E-19
score: 78.4
coord: 498..575
e-value: 7.2E-13
score: 58.8 |
| IPR001478 | PDZ domain | PFAM | PF00595 | PDZ | coord: 760..843
e-value: 1.8E-16
score: 60.2
coord: 491..571
e-value: 2.8E-7
score: 30.7 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 489..575
score: 16.365 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 759..832
score: 19.923 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 731..857
e-value: 5.1E-34
score: 118.6 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 472..585
e-value: 8.4E-19
score: 69.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 852..884 |
| None | No IPR available | PANTHER | PTHR19964 | MULTIPLE PDZ DOMAIN PROTEIN | coord: 747..847
coord: 511..559 |
| None | No IPR available | PANTHER | PTHR19964:SF69 | ARC, ISOFORM A | coord: 511..559 |
| None | No IPR available | PANTHER | PTHR19964:SF69 | ARC, ISOFORM A | coord: 747..847 |
| None | No IPR available | CDD | cd00992 | PDZ_signaling | coord: 488..572
e-value: 1.46186E-13
score: 64.5102 |
| None | No IPR available | CDD | cd00992 | PDZ_signaling | coord: 757..844
e-value: 3.77229E-22
score: 89.163 |
| IPR036034 | PDZ superfamily | SUPERFAMILY | 50156 | PDZ domain-like | coord: 736..852 |
| IPR036034 | PDZ superfamily | SUPERFAMILY | 50156 | PDZ domain-like | coord: 468..581 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10860 ID=Tk10860|Name=Tk10860|organism=Tigriopus kingsejongensis|type=polypeptide|length=949bp
MRLFTATNPGRSSPELVRHSQVPENSRFPSQSSHLGSKRDSQASTLSLYR
SPEVEERSRGGGTTPPREHSPASLVRGVSTLGRKFSRRFEKFGESETARK
LRMASPSRKYQWALGGGYDSGGSTNNLSASVGDNQAQSTSPQAGHNHRDD
DPGKKRVSRVDSFRNFLSLASSTVSVSTLRTPRAVKRRSRNADKKQKHGH
QFVDVGTSTNGVPESRAGGSSSLPGGLNSRFGSDLTLLDTQSDLALSECQ
SEVDLRYYYMATEDEDDRSVVSDGFVRKPQAVSHASRSAGNLAHNARLGI
LPENRTINFQEAGIVYNSSNGMQIKSYGLIDGKSDSGKGSLGGSGPPGSY
HKAIANHSGSIVNESGYSSDYASGTNSTSSRASPRGSLDEDPGSQEKTSS
DDSRSLTPPLKEREERSRLEKITPATAPPLLMKPPKKPVRISKMGSTKRS
HSSDDQHQLGRDHPEQQSLPLSLPSSTSTQTKMTKDYKMIRLVKEPNTEL
GIIIAKKKLKELQTTGFQIVHIEPEGLIDRDGRFQVGDEIINVNSQRLRG
LDITQAIQSLRQPGPELSIVICRDVPHPTSNPRSPLSKSEDTLVISERRV
REEHDRIARKLHDYENINPEEARNLRNSYRGGGSEDYLSPKSSFVTRTYI
GTGSSSTSSLAMKIHRKSLSRLASNPGSLTSLVETSLNSDVDEVRSSCSA
YQPVRMRRDAEGDETRSNRSFQGHRSFSLQSGYVSDSMSWAAARRVNAKN
SPHQYSLHTVVFEKGPGRKGLGFSVVGGRDSPKGNMGIFVKTIFPNGQAN
DQASLREGDEILSVNGHSTQGLSHSEAIAIFKGIRSGKVTVHIARRDPTI
QSQTTVEPPKATTTSSSSTVANHNTNHNTSTSGRSLYPGSDIAKLILWHL
EENPIKCYLQDTVSYQTAWTWLLYHTDPSPRFFVIVQIFACFKWISQVL back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0005515 | protein binding |
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