Tk10875, Tk10875 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10875
Unique NameTk10875
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1019
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007109Brix domainSMARTSM00879Brix_2coord: 725..907
e-value: 7.8E-51
score: 184.9
IPR007109Brix domainPFAMPF04427Brixcoord: 735..906
e-value: 1.0E-34
score: 120.3
IPR007109Brix domainPROSITEPS50833BRIXcoord: 722..913
score: 29.804
NoneNo IPR availableGENE3D3.40.190.10coord: 239..248
e-value: 2.4E-24
score: 87.8
coord: 358..454
e-value: 2.4E-24
score: 87.8
NoneNo IPR availableGENE3D1.10.287.70coord: 249..357
e-value: 2.4E-24
score: 87.8
coord: 512..528
e-value: 2.4E-24
score: 87.8
NoneNo IPR availableGENE3D3.40.190.10coord: 455..511
e-value: 2.4E-24
score: 87.8
coord: 205..238
e-value: 2.4E-24
score: 87.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 987..1001
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 976..1019
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 286..325
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 344..1019
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 265..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 326..343
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 153..247
coord: 356..489
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 724..908
NoneNo IPR availableTMHMMTMhelixcoord: 326..348
NoneNo IPR availableTMHMMTMhelixcoord: 263..280
IPR026532Ribosome biogenesis protein BRX1PANTHERPTHR13634RIBOSOME BIOGENESIS PROTEIN BRIXcoord: 697..973

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold86_size395752-snap-gene-0.7-mRNA-1maker-scaffold86_size395752-snap-gene-0.7-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10875 ID=Tk10875|Name=Tk10875|organism=Tigriopus kingsejongensis|type=polypeptide|length=1019bp
MILVSINIRPQFFLVDPGWTWRSGWTRQSGGLGNPGGLGNQGGLGDPGGL
GDPGGLGNPGGFGDPGGLGYRLRHIHSSCLVVHVDASRANLSLILETLQL
LDIKNKTLAVINNIPNGLDQSIQDIHRSYAIQIQDQSGSELYPIHTKASL
RGKFLTASFVDLWPYMNVNEEIVTGADQDILAAMKSALQFQASLTLAQTA
LDYFMNVSKQQIDFGVGQATITFDRIHWVDYGMNMFPRELGFVSALTPRV
DKFDTLIRLFDSTSWIFILGCLVAMFLVLISMDYLQNGHQIGFDDVNVSW
MRALTALVQQSQPVKLLEQGRFRARFVLLAIWLLGGFYLSLFYESTLLTT
LTIINYKRPIDTPQEIIDSGLPVYTLDATFLSRSLRCSPLPIYQELYQKA
VVERGGLMPLGKRNGPQYVKEVDEGQAFMTRITVEGRSIPNRRFHSHTYF
VGSSAWIFPRGSNLKTIFDQTLLTMQQTGLLKHAEDKFIFERMVKDQVFL
ANDRHQKAEFAKIDIREFLPIFIMVLIGRMAEDLASRKSSLMSLMSSRMT
LGLPQILAVIEHGNLTLGGSPNLDDGSHFFLSVGQGADDEEPVQEIQWDS
MRRHDIARAANGALPSVGGENDNGSNGALQSAMKLPTSISYSGMTKKRPS
TSRPARGAKKSKKAAVVPEPQEEEVPLVRFESESEGEDGDAILDSDVSSA
SDGEQEDAPAKAVKQSKWTNRQRVLVLGCRGIGFRDRHLMDDLRSLMPHS
KSDSKMRRTESLFVVNEVAEMKNCNKCLLFEGRKGRKDLYLWAANIARGP
SAKFLVENVHTMAELKMTGNCLKSSRPLLSFDKQFDADPYLQVLKELFTQ
IFSVPNHHPKSQPFFDHVYTFSVVDNKVWFRNYQILTEEDGSLAEIGPRF
VLNPIKVFESSFSGQTLWENPKYVTPTAHRSMMKRMKAGKYRHNVQSKAA
YEATRPTEPTYDLDPTDQVFANDEVADQEQRKKFSSVRVPLKQRKRKNTK
RGKDTPNVDIESLTQTVTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007109Brix
IPR026532BRX1
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