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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002781 | Transmembrane protein TauE-like | PFAM | PF01925 | TauE | coord: 131..373
e-value: 1.2E-20
score: 74.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 9..42 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..48 |
| None | No IPR available | PANTHER | PTHR31154 | UNCHARACTERIZED | coord: 42..424 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 159..169 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 332..354 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 294..299 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 95..114 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 170..189 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 387..405 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 355..360 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 190..194 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 115..125 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 225..241 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 300..320 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 195..213 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..94 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 126..158 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 214..224 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 361..381 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 382..386 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 406..429 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 261..293 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 242..260 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 321..331 |
| None | No IPR available | TMHMM | TMhelix | | coord: 332..354 |
| None | No IPR available | TMHMM | TMhelix | | coord: 300..322 |
| None | No IPR available | TMHMM | TMhelix | | coord: 191..213 |
| None | No IPR available | TMHMM | TMhelix | | coord: 388..405 |
| None | No IPR available | TMHMM | TMhelix | | coord: 164..186 |
| None | No IPR available | TMHMM | TMhelix | | coord: 129..151 |
| None | No IPR available | TMHMM | TMhelix | | coord: 225..242 |
| None | No IPR available | TMHMM | TMhelix | | coord: 257..279 |
| None | No IPR available | TMHMM | TMhelix | | coord: 361..383 |
| None | No IPR available | TMHMM | TMhelix | | coord: 95..114 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10880 ID=Tk10880|Name=Tk10880|organism=Tigriopus kingsejongensis|type=polypeptide|length=429bp
LDPHPALTVRSQNMESKSPSKASPLDLKSVSSGFSNQDPQDESSKPHQLK
HKIKRFFVKYFFEGQKLSSEQTSAIENLQDDAPWTERILVNHRRLVGILI
PLVFFQVCWWTLAIRWDYFQYFPDRYILSITMIFGATIAGMTSEGGGAVA
FPVMTLALGIQPAVARDFSLMIQACGMSAAAFTIVWMKIQLEMRSIIFCS
LGGVFGMVLGLEVFDDMLAPPTKKLGFVCVWFSFAFALYLLNREHKRKTF
DLIPNFGIWQAIVLTLTGCVGGIFSAIAGSGVDICSFSILSLLFRVSEKV
ATPTSVVLMAINTCVGFYWRHLMTETGVEPEAWKFLAVCVPIVVFFAPFG
SFLSSHFHRQVLAFLIYILDTIALISAFIVIPMTWQRSVLSGCLITGGFV
IFFCISKAGERLLRTLDDQEKKTVVNIGV back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002781 | TM_pro_TauE-like |
Vocabulary: Cellular Component
| Term | Definition |
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| GO:0016021 | integral component of membrane |
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