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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR001907 | ATP-dependent Clp protease proteolytic subunit | PRINTS | PR00127 | CLPPROTEASEP | coord: 28..48
score: 68.1
coord: 59..76
score: 62.22
coord: 137..156
score: 41.0
coord: 80..99
score: 64.38 |
| IPR001907 | ATP-dependent Clp protease proteolytic subunit | HAMAP | MF_00444 | ClpP | coord: 1..162
score: 31.888 |
| IPR001907 | ATP-dependent Clp protease proteolytic subunit | CDD | cd07017 | S14_ClpP_2 | coord: 3..149
e-value: 1.20474E-91
score: 275.474 |
| IPR003593 | AAA+ ATPase domain | SMART | SM00382 | AAA_5 | coord: 217..439
e-value: 2.3E-9
score: 47.1 |
| IPR019489 | Clp ATPase, C-terminal | SMART | SM01086 | ClpB_D2_small_2 | coord: 423..517
e-value: 1.0E-32
score: 124.7 |
| IPR019489 | Clp ATPase, C-terminal | PFAM | PF10431 | ClpB_D2-small | coord: 423..500
e-value: 3.3E-16
score: 59.0 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 163..421
e-value: 4.1E-107
score: 359.5 |
| None | No IPR available | GENE3D | 1.10.8.60 | | coord: 422..525
e-value: 1.6E-38
score: 132.9 |
| None | No IPR available | GENE3D | 3.90.226.10 | | coord: 1..162
e-value: 1.3E-60
score: 206.4 |
| None | No IPR available | PANTHER | PTHR11262:SF4 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL | coord: 208..521 |
| None | No IPR available | PANTHER | PTHR11262:SF4 | ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL | coord: 134..208 |
| None | No IPR available | CDD | cd00009 | AAA | coord: 184..301
e-value: 7.29584E-15
score: 69.8675 |
| IPR023562 | Clp protease proteolytic subunit /Translocation-enhancing protein TepA | PFAM | PF00574 | CLP_protease | coord: 2..150
e-value: 1.9E-70
score: 236.4 |
| IPR003959 | ATPase, AAA-type, core | PFAM | PF07724 | AAA_2 | coord: 218..416
e-value: 4.2E-48
score: 163.6 |
| IPR004487 | Clp protease, ATP-binding subunit ClpX | TIGRFAM | TIGR00382 | TIGR00382 | coord: 156..516
e-value: 3.7E-180
score: 597.3 |
| IPR004487 | Clp protease, ATP-binding subunit ClpX | PANTHER | PTHR11262 | HSL AND CLP PROTEASE | coord: 134..208
coord: 208..521 |
| IPR004487 | Clp protease, ATP-binding subunit ClpX | HAMAP | MF_00175 | ClpX | coord: 103..521
score: 47.196 |
| IPR033135 | ClpP, histidine active site | PROSITE | PS00382 | CLP_PROTEASE_HIS | coord: 81..94 |
| IPR018215 | ClpP, Ser active site | PROSITE | PS00381 | CLP_PROTEASE_SER | coord: 59..70 |
| IPR029045 | ClpP/crotonase-like domain superfamily | SUPERFAMILY | 52096 | ClpP/crotonase | coord: 2..149 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 168..504 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10914 ID=Tk10914|Name=Tk10914|organism=Tigriopus kingsejongensis|type=polypeptide|length=525bp
MVGQVEDNMANLIVAQMLFLESENPDKDISLYINSPGGVVTAGMAIYDTM
QFIKPNVSTVCIGQAASMGAIILTGGAEGKRFALPNSRVMIHQPLGGYQG
QATDIDIHAKEILKMRHSLNGILASHSKQTIETIEKDTERDNFMDAQQAD
MIDIDDEDIEQANTEKKPIPVPRSIHDSLNQYIIGQERAKKILSVAVYNH
YKRIQGQQATSDKIDIAKSNILLIGPTGSGKTLLAETLANLLDVPFTIAD
ATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAEQGIIYVDEIDKISRKSD
NPSITRDVSGEGVQQALLKLIEGTVASIPPQGGRKHPQQEFLQVNTRNIL
FICGGAFSGLEKVVLDRTERSGIGFGADVRSKDAASNNVGEVFKMVEPED
LVKYGLIPEFIGRLPVVASLEELDEDALIQILTEPKNALIKQYAKLFEYE
GVELEVRKEALQAIAKKATLRKTGARGLRSILEQTLLETMYEIPSMKNVQ
KVIIDTNVVMEGSRPLFVFSEDKEA back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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