Tk10921, Tk10921 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10921
Unique NameTk10921
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length173
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015415Vps4 oligomerisation, C-terminalPFAMPF09336Vps4_Ccoord: 106..144
e-value: 4.7E-6
score: 26.4
NoneNo IPR availableGENE3D1.10.8.60coord: 48..124
e-value: 4.8E-16
score: 60.9
NoneNo IPR availablePANTHERPTHR23074AAA ATPASEcoord: 52..144
NoneNo IPR availablePANTHERPTHR23074:SF17FIDGETIN-LIKE PROTEIN 1coord: 52..144
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold238_size242079-snap-gene-1.19-mRNA-1maker-scaffold238_size242079-snap-gene-1.19-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10921 ID=Tk10921|Name=Tk10921|organism=Tigriopus kingsejongensis|type=polypeptide|length=173bp
MVEQGRIDESPIFSGAGSILPLGGIIMTEVFMVLASSMFEAMNLRISTAS
YQLLSKHGDPLCQEDIHLVAKATGGYSGSDLTHLARDAAFGPIRDVPSEG
LLHISKSKLRPIQLNDFRNALQRVRVSITGDYLERYLDWNRRFGDGAAGF
SEREEVGAAAVFRQLFPRAWAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015415Vps4_C
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