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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 160..182 score: 22.19 coord: 106..127 score: 20.8 coord: 74..98 score: 19.5 coord: 334..360 score: 26.29 coord: 253..276 score: 16.36 coord: 299..323 score: 21.51 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 89..352 e-value: 1.6E-15 score: 57.0 |
None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 67..378 e-value: 1.3E-52 score: 180.7 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 467..523 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 506..523 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 469..496 |
None | No IPR available | PANTHER | PTHR22751 | G-PROTEIN COUPLED RECEPTOR-RELATED | coord: 68..382 |
None | No IPR available | PANTHER | PTHR22751:SF173 | FMRFAMIDE RECEPTOR | coord: 68..382 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 148..176 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 98..108 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 332..355 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 356..523 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 254..277 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 218..253 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..71 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 278..297 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 109..128 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 129..147 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 177..196 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 197..217 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 321..331 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 298..320 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 72..97 |
None | No IPR available | CDD | cd14978 | 7tmA_FMRFamide_R-like | coord: 73..363 e-value: 3.29316E-76 score: 240.227 |
None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 62..383 |
None | No IPR available | TMHMM | TMhelix | | coord: 199..221 |
None | No IPR available | TMHMM | TMhelix | | coord: 254..276 |
None | No IPR available | TMHMM | TMhelix | | coord: 334..356 |
None | No IPR available | TMHMM | TMhelix | | coord: 297..319 |
None | No IPR available | TMHMM | TMhelix | | coord: 110..132 |
None | No IPR available | TMHMM | TMhelix | | coord: 75..97 |
None | No IPR available | TMHMM | TMhelix | | coord: 147..169 |
IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 89..352 score: 26.911 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10932 ID=Tk10932|Name=Tk10932|organism=Tigriopus kingsejongensis|type=polypeptide|length=523bp MANSQEIVDVMSYDSRDEEILHLLGGNLTSNLSALLLNAPMDQGDSFAAR HASGEPDKDPQLWWAFPVTFEFVVHGVLSCCIGMGGLFGNIISIIILSRP QMKSSINTILIGLVTCDSIVIVTSVFMFSFTVFRYTGSAVFQFYYWQIYP YVLCVVYPIGMIAQTGSIYMTLSVTIERYLVVCWPLKARSICTNGRAKLS VFFFALFAVIYNIPRFFEVTWETQYLEDFGENRTVIAVTDFRKSALYIKL YISWMYLVFMYIIPFVSLAVLNLLIFLEIRKANVTRSILSNQEKKEHNLA VMLLVVVFIFFICNILPLILNIIELFHKPNPQVIQVSNLLVTINSSVNIL IYCIFGNKFKTIFLQIFCGRKPHIQQMRTCRDFRRNQYESASMRSTTMIE APLCTNRPKGSLTPCTSLSPIYSCGSHQPMSSLLIAKTSPSGRHLQLSGG APKSHAMELADFKRDMHNNQRNGSTSSSNRSSGLRLNSSLSYQESDSRRN SSRKGRSPRPNSASFNQDFQEIR back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
Term | Definition |
GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Biological Process
Term | Definition |
GO:0007186 | G-protein coupled receptor signaling pathway |
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