Tk10943, Tk10943 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10943
Unique NameTk10943
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length415
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.470coord: 66..239
e-value: 1.9E-10
score: 42.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..415
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..415
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..60
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..22
score: 0.698
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 5..22
IPR033375CGG triplet repeat-binding protein 1PANTHERPTHR32344FAMILY NOT NAMEDcoord: 337..387
coord: 232..278

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold234_size243041-snap-gene-1.28-mRNA-1maker-scaffold234_size243041-snap-gene-1.28-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10943 ID=Tk10943|Name=Tk10943|organism=Tigriopus kingsejongensis|type=polypeptide|length=415bp
MNTSSFLASCFCLVLVISIVSTEDQKEEREIRYELTNVAGGLLAAGLIII
LGATGAFYALTSLNASRRQAQDPSTPFNSKNEGKRLERCQKILGFLKRHG
STVKIISDKKIFTVDQVYNRRNDRFIAGSPEEVKGVFRTKHPAQVMVMGV
LASDGKKMPPNCFRVGEKIGANEYYKVLSYTVLPWLKAQYPEDNNVWTQD
GAPSHTSVKHQKSEKHQKHIQLKVLKGNGVILPEGMSPDDVSKMKFCPTT
SVDVERSFSQYKNILSDRRHSFTKENIKLNEREDYPFKYLDSNLACCKVC
ETSLRATQRSQLLQHQKSEKHQKHIQLKVLKGNGVILPEGMSPDDVSKMK
FCPTTSVDVERSFSQYKNILSDRRHSFTKENIRPNMVTLPVTEDRTGARA
SPSQRVNVRDGTTGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033375Cggbp1
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO:0001227DNA-binding transcription repressor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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