Tk10952, Tk10952 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10952
Unique NameTk10952
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length194
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 143..194
e-value: 7.7E-8
score: 34.1
NoneNo IPR availablePANTHERPTHR10390:SF33PROTEIN OPTIXcoord: 18..192
NoneNo IPR availablePANTHERPTHR10390HOMEOBOX PROTEIN SIXcoord: 18..192
IPR031701Homeobox protein SIX1, N-terminal SD domainPFAMPF16878SIX1_SDcoord: 29..144
e-value: 9.6E-44
score: 148.3
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 169..192
e-value: 2.7E-4
score: 20.7
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 151..192
e-value: 3.31681E-6
score: 40.6897
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 147..192

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold129_size324999-processed-gene-0.4-mRNA-1snap_masked-scaffold129_size324999-processed-gene-0.4-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10952 ID=Tk10952|Name=Tk10952|organism=Tigriopus kingsejongensis|type=polypeptide|length=194bp
MESIHGGKSESTTVDYLQRPSLPLPTLNFSVQQVATVCETLEESGDIERL
GRFLWSLPVAHPNTEELNKNESVLRAKAIVAFHLGNFKELYRILESTRFT
SKDSHLKLQTLWLEAHYLEAEKMRGRPLGPVDKYRVRKKYPLPRTIWDGE
QKTHCFKERTRSLLREWYLQDPYPNPGKKRELAQATGLTPTQFN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031701SIX1_SD
IPR008422Homeobox_KN_domain
IPR001356Homeobox_dom
IPR009057Homeobox-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
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