Tk10954, Tk10954 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10954
Unique NameTk10954
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length183
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 107..178
e-value: 5.0E-17
score: 72.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 108..168
e-value: 8.6E-14
score: 51.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 106..183
score: 15.272
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 88..183
e-value: 2.0E-23
score: 84.5
NoneNo IPR availablePANTHERPTHR44166FAMILY NOT NAMEDcoord: 2..183
NoneNo IPR availableCDDcd12321RRM1_TDP43coord: 107..183
e-value: 4.3621E-53
score: 161.785
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 106..182

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold129_size324999-snap-gene-1.19-mRNA-1maker-scaffold129_size324999-snap-gene-1.19-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10954 ID=Tk10954|Name=Tk10954|organism=Tigriopus kingsejongensis|type=polypeptide|length=183bp
MSCYITVAEEEGDEPIELPSEEDATLLLTTLSAQFPGACGLKFRNPETHS
WRGVRLAEGRLYPPADTGWGTSIYVSVLPKADKRKSEDHQESSTAKNKKL
EKNKCSDLIVLGLPWKTTEPELREYFEPFGEVLMAQVKKDIKTGQSKGFG
FIRFGSYESQMRVLAQRHMIDGRWCDVKIPNSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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