Tk10955, Tk10955 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10955
Unique NameTk10955
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length820
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016158Cullin homology domainSMARTSM00182cul_2coord: 496..646
e-value: 1.3E-65
score: 233.9
IPR016158Cullin homology domainPROSITEPS50069CULLIN_2coord: 466..696
score: 58.322
IPR019559Cullin protein, neddylation domainSMARTSM00884Cullin_Nedd8_2coord: 748..815
e-value: 4.3E-35
score: 132.6
IPR019559Cullin protein, neddylation domainPFAMPF10557Cullin_Nedd8coord: 751..812
e-value: 1.2E-26
score: 92.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 733..820
e-value: 1.5E-31
score: 110.1
NoneNo IPR availableGENE3D1.20.1310.10coord: 86..249
e-value: 2.3E-52
score: 179.4
NoneNo IPR availableGENE3D1.10.10.2620coord: 581..732
e-value: 4.8E-46
score: 158.3
NoneNo IPR availableGENE3D1.20.1310.10coord: 466..580
e-value: 5.9E-44
score: 150.8
NoneNo IPR availableGENE3D1.20.1310.10coord: 355..465
e-value: 2.5E-23
score: 84.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..83
NoneNo IPR availablePANTHERPTHR11932:SF123CULLIN-2coord: 86..820
NoneNo IPR availablePANTHERPTHR11932CULLINcoord: 86..820
IPR001373Cullin, N-terminalPFAMPF00888Cullincoord: 99..720
e-value: 2.1E-163
score: 545.1
IPR016157Cullin, conserved sitePROSITEPS01256CULLIN_1coord: 794..820
IPR036317Cullin homology domain superfamilySUPERFAMILY75632Cullin homology domaincoord: 463..729
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 732..820
IPR016159Cullin repeat-like-containing domain superfamilySUPERFAMILY74788Cullin repeat-likecoord: 95..460

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold129_size324999-snap-gene-1.22-mRNA-1maker-scaffold129_size324999-snap-gene-1.22-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10955 ID=Tk10955|Name=Tk10955|organism=Tigriopus kingsejongensis|type=polypeptide|length=820bp
MAQPRSGQSENRQSLTPLGSEPSQPESLNGRVAGRKSNSSKPCSTQPGRS
RPSPRGTRPVSIGISRDPSLSPSVPPHPQTRTTLRMSLRPKRVDFTQTWA
SLQETITGVIMFSNVPRAIWNDRFTDVYSLCVAYPEPLADRLYQETKSFL
EDHVKSLMTQVTKGGERELLKSYFEAWTKFSQGIDYLHKLYSYLNNQHIR
KQKMSDAELTYGSLSIDHNEQMKEIGELGLDTWKKLMIEPLKDRLVSLLL
DGIRYDRLGETGSTGSTQFQSDNVIKGVINSFVSVEEYKKKGNLDLYEDI
FEKPFLTATGDYYREEAQRFLQEDSISLFMQRVIQRIESENVTSECEQRM
VGEHISFLHSECKPMVEKELRSDLANMYVLLKPIAGAQKVLLDEVQTHIK
SQGLKVIAALQGDSPATDFVENVLDVHQKYREMISATFQGDLSFIGAMDK
AMTAIINHRPPKTASKSPELLAKYCDSLLKKSQKGISENEIDEKLNKSIT
VFKYLDDKDVFQKFYSRNLGKRLIHQQSHSMDLEEAMINRLKQACGYEFT
NKFHRMFTDISVAEDLNTKFTDHLNANSISVGINYFVRVLQQGAWPMSHT
GVMSLNIPQELERTVQAYEKFYAKQFNGRKLTWLHHLSNGDVKLGYLAKS
YIVNMTTFQMALLLLFEKSDTLSYSELQETTNIQADVFPRHVQSLLDSKL
LVCNTEELGTSSTISLNMKYTNKRTKFRIAGTIQRETPQEVEQTHQAVDE
DRKMYLQAAIVRIMKSRKVLKHTLLIQEVISQSKSRFTPSIPMIKKVIEN
LIDKAYIERTKNSDEYAYMA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016158Cullin_homology
IPR019559Cullin_neddylation_domain
IPR036388WH-like_DNA-bd_sf
IPR001373Cullin_N
IPR016157Cullin_CS
IPR036317Cullin_homology_sf
IPR036390WH_DNA-bd_sf
IPR016159Cullin_repeat-like_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0031625ubiquitin protein ligase binding
Vocabulary: Cellular Component
TermDefinition
GO:0031461cullin-RING ubiquitin ligase complex
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