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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR019188 | Small nuclear RNA activating complex (SNAPc), subunit SNAP43 | PFAM | PF09808 | SNAPc_SNAP43 | coord: 21..206
e-value: 5.0E-31
score: 108.0 |
| IPR019188 | Small nuclear RNA activating complex (SNAPc), subunit SNAP43 | PANTHER | PTHR15131 | SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1 | coord: 17..386 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 374..405 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 390..405 |
| None | No IPR available | PANTHER | PTHR15131:SF3 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 1 | coord: 17..386 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk10958 ID=Tk10958|Name=Tk10958|organism=Tigriopus kingsejongensis|type=polypeptide|length=405bp
MAKTTTIFPPAILAADKDVESLLERVVALFDAQDGLRFEYFKEIWHAMKF
PWIFHGHDTFRDLYEFTDELLDLVKAKLACPDHDFGLRAAALYALYSIYL
KQPLKKKVRIRLTQSEFKSTQSFIAECQEEQHWDLVYCWCQLQATYALEY
TGSRIVMGVETANVLDSRSDPNPGIAFYHNRQNPFKSGEVHELLGQINRT
HHHYVKIRNALRQEDAQTDSGLRLVSEDLPEALEAITEHVYSAPVVRGQD
VAAQPVTRSGNDLVESGLTIGDRRKKLIQGAFSTEQETSLQRQYKKYRGP
EEAEASVAPHESEPLFSDPDEVVSDEESVAKLKPHRKGRITRGSDKTKEL
EVGEVVWEPEDHNLEAELARAQKRLAVGSQVEKKATAKPGTGTKKTKKNA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR019188 | SNAPc_SNAP43 |
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