Tk10960, Tk10960 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10960
Unique NameTk10960
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length329
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 288..322
NoneNo IPR availableGENE3D1.20.5.170coord: 272..324
e-value: 6.0E-21
score: 76.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..273
NoneNo IPR availablePANTHERPTHR22952CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATEDcoord: 254..324
NoneNo IPR availableCDDcd14690bZIP_CREB1coord: 272..323
e-value: 2.80998E-32
score: 112.339
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 272..324
IPR001630cAMP response element binding (CREB) proteinPRINTSPR00041LEUZIPPRCREBcoord: 285..305
score: 93.33
coord: 305..322
score: 76.3
coord: 88..110
score: 45.22
coord: 267..283
score: 65.1
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 266..329
e-value: 5.8E-10
score: 49.1
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 271..327
e-value: 5.5E-19
score: 67.9
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 276..290
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 270..329
score: 11.565
IPR003102Coactivator CBP, pKIDPFAMPF02173pKIDcoord: 94..117
e-value: 3.1E-6
score: 26.5
IPR003102Coactivator CBP, pKIDPROSITEPS50953KIDcoord: 71..130
score: 9.461
IPR029825cAMP-dependent transcription factor ATF1PANTHERPTHR22952:SF258CYCLIC AMP-DEPENDENT TRANSCRIPTION FACTOR ATF-1coord: 254..324

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold129_size324999-snap-gene-1.25-mRNA-1maker-scaffold129_size324999-snap-gene-1.25-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10960 ID=Tk10960|Name=Tk10960|organism=Tigriopus kingsejongensis|type=polypeptide|length=329bp
MGDDGGEAGNTARRVVDTLLREASFAHHGATIPANLGLEKIPGQWPCFSD
GARLAASGKSSGGKCTSPQDHPIELTSRRRRAKFAEDEEVPSEARYFLKR
RLSYRKIFNDLGGSNKMIQEDRSEAISGSESSASEDLNSTTVSSSTPLSN
LSTVSSGIPGNYNTISQGLSHSPSSGHMTLGSNDPHQTFAPMSGNHLSSG
PHHSGMRSPSANSHVIQYSHQDGNSFLLPTALTNHGLHGMSPLNGSHSPN
LLPPHSHGGHSVHSDNPDSNNKREMRLMKNREAARECRRKKKEYIKCLEN
RVAVLETQNKALIEELKSLKELYTGTKQS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001630Leuzip_CREB
IPR004827bZIP
IPR003102Coactivator_CBP_pKID
IPR029825ATF1
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
GO:0005515protein binding
GO:0043565sequence-specific DNA binding
GO:0046982protein heterodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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