Tk10995, Tk10995 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk10995
Unique NameTk10995
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length781
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 266..391
e-value: 6.5E-25
score: 98.8
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 266..391
e-value: 5.9E-20
score: 71.4
IPR025069Cleavage and polyadenylation specificity factor 2, C-terminalPFAMPF13299CPSF100_Ccoord: 638..778
e-value: 8.9E-29
score: 100.7
IPR011108Zn-dependent metallo-hydrolase, RNA specificity domainPFAMPF07521RMMBLcoord: 549..621
e-value: 3.7E-13
score: 49.1
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 546..631
e-value: 3.4E-5
score: 25.2
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 33..280
e-value: 3.2E-76
score: 257.8
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 40..401
coord: 481..629
IPR001279Metallo-beta-lactamasePFAMPF16661Lactamase_B_6coord: 45..217
e-value: 1.5E-59
score: 200.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..454
NoneNo IPR availablePANTHERPTHR11203CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTORcoord: 23..781
IPR027075Cleavage and polyadenylation specificity factor subunit 2PANTHERPTHR11203:SF5CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2coord: 23..781
IPR035639CPSF2, metallo-hydrolase domainCDDcd16293CPSF2-like_MBL-foldcoord: 40..227
e-value: 8.47017E-110
score: 330.637

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold281_size224178-snap-gene-1.30-mRNA-1maker-scaffold281_size224178-snap-gene-1.30-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk10995 ID=Tk10995|Name=Tk10995|organism=Tigriopus kingsejongensis|type=polypeptide|length=781bp
LELHGRVSPSLLPRPIAMTSIIKFRPLSGGVMPADSDACPPHCYLLEVDQ
FTFLCDCGWDAQFDMNIMNEIKAVINKIDAVLLSYPDIGHLGGLPYVVST
LGLSCPIYATVPIYKMGQMFMYDLYQARYNMEDFKLFTLDEVDKTFEMIT
QLKYNQTIQLKGKGEGIAITPIPAGHMIGGSIWKIVKEGEEDIVYAVDFN
HKKEQHLNGSDIEKIQRPSLFITDGFNASYRQLRRRDRDEKLMTNILQTL
RNNGNVLVCVDTAGRVLELAHMIDHLWQIQDSGLIAYSLALLNNMSFNVI
EFAKSQIEWMSDKLMRNFEGRRNNPFQFKHLKLCHSMAEVNKVPSPKVVL
ASMTDLECGFSRDLFLNWCGKPQNNIIITSRTGEGTLAHDLITNGTNRVL
NLEIKKRIKLTGAELEEHRRKERELASKSKQSEMMMEDDESSDEEMETGG
TKGPIKHDIIMKVNAPGKTQQKTFFKAIKTKHMMFPFVDEKIKWDDYGEI
VKPEDWVDGTIDHEQPKADPYLRGHPNDADEGKDIVEVPTKCVSSVQKIP
LKAQVQFIDFEGRSDGESIVKVLQQVKPRRLILVRGREDQCNNLANHCKQ
LWAKALESSGQSQQKVNVYTPKNGETVDATTESFIYQVKLPESLVGKLLF
SKGKDGLLAWVDGRISFALDEVADIQPRDDGDEAMEEAPKKKPAIPTLLP
LPDDEVHAHPTVFVNELKLSDFKIVLTKSGISSEFAGGVLFCGNGNVALR
RHDSGRVTIEGTVCDDYYRVRDLLYEQYAIV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022712Beta_Casp
IPR025069Cpsf2_C
IPR011108RMMBL
IPR036866RibonucZ/Hydroxyglut_hydro
IPR001279Metallo-B-lactamas
IPR027075CPSF2
IPR035639CPSF2_MBL
Vocabulary: Biological Process
TermDefinition
GO:0006378mRNA polyadenylation
GO:0006379mRNA cleavage
Vocabulary: Cellular Component
TermDefinition
GO:0005847mRNA cleavage and polyadenylation specificity factor complex
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