Tk11055, Tk11055 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11055
Unique NameTk11055
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length143
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009025DNA-directed RNA polymerase, RBP11-like dimerisation domainPFAMPF13656RNA_pol_L_2coord: 60..130
e-value: 2.1E-26
score: 91.4
IPR036603RNA polymerase, RBP11-like subunitGENE3D3.30.1360.10coord: 42..141
e-value: 7.7E-32
score: 110.8
IPR036603RNA polymerase, RBP11-like subunitSUPERFAMILY55257RBP11-like subunits of RNA polymerasecoord: 54..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availablePANTHERPTHR13946:SF28DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC2coord: 44..139
NoneNo IPR availablePANTHERPTHR13946DNA-DIRECTED RNA POLYMERASE I,II,IIIcoord: 44..139
IPR008193DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved sitePROSITEPS01154RNA_POL_L_13KDcoord: 64..95
IPR033898DNA-directed RNA polymerases I and III subunit AC19CDDcd07029RNAP_I_III_AC19coord: 52..134
e-value: 1.22674E-42
score: 133.897

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold23_size669530-processed-gene-1.6-mRNA-1snap_masked-scaffold23_size669530-processed-gene-1.6-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11055 ID=Tk11055|Name=Tk11055|organism=Tigriopus kingsejongensis|type=polypeptide|length=143bp
MSYEEILPPTYHRQVAPAAHQADPLTGPPSAATPFQPREATPKRKLVMLA
SAEAHSENCRTFIFKGESHTLGNALKNVILQNPAVSFCGYSIPHPAEDQM
FLRIQTVANVPAQDVLKQGLHDLKAICGITRSKFNRAVQKFEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009025RBP11-like_dimer
IPR036603RBP11-like
IPR008193RNA_pol_Rpb11_13-16kDa_CS
IPR033898RNAP_AC19
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
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