Tk11064, Tk11064 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11064
Unique NameTk11064
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length390
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 121..333
e-value: 3.0E-36
score: 136.4
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 122..323
e-value: 3.4E-19
score: 69.3
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 121..333
score: 8.864
IPR016447Translocation associated membrane proteinPIRSFPIRSF005449TRAMcoord: 1..390
e-value: 1.5E-144
score: 479.3
IPR013599TRAM1-like proteinPFAMPF08390TRAM1coord: 49..117
e-value: 7.0E-16
score: 57.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..369
NoneNo IPR availablePANTHERPTHR12371TRANSLOCATION ASSOCIATED MEMBRANE PROTEINcoord: 1..368
NoneNo IPR availablePANTHERPTHR12371:SF11TRANSLOCATING CHAIN-ASSOCIATED MEMBRANE PROTEINcoord: 1..368
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..216
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 243..262
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 324..390
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 301..323
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..242
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 217..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 282..300
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 263..281
NoneNo IPR availableTMHMMTMhelixcoord: 301..323
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 196..218
NoneNo IPR availableTMHMMTMhelixcoord: 161..183
NoneNo IPR availableTMHMMTMhelixcoord: 222..244
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 264..286
NoneNo IPR availableTMHMMTMhelixcoord: 127..146

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold23_size669530-processed-gene-2.9-mRNA-1snap_masked-scaffold23_size669530-processed-gene-2.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11064 ID=Tk11064|Name=Tk11064|organism=Tigriopus kingsejongensis|type=polypeptide|length=390bp
MVVKRRSNTKNPPFFSHEFVIQNHADIVACVAMVFVVGLMFQVSSPLASL
FIALHHNATVAVPVGGPGGQTVDMTLYTAGVKDIPAVFFYLLIAIVMHQI
IQEYLLDKVNRKLHLSKIKHAKFNESGQLLSFYLISIAWAGDIFFRENLF
SIRHFWEGYPHVYMSFTFKFYFIVQLAYWLHILPELYFQKVKREDMPARI
QYAALYLVFIGGAYVFSYTRVALCLLVVQYLVEALFHACRLLSYADKTEV
ARPLYTLHDTLFVLGRLASISLAVLTFWYGLALAPAEEQVIDLAKGNFNT
FFFRMNALVAVCLLQAWLMWNFITFQLRRKRVGSAGSAAGSNASRSKRTQ
QERAKHRKEQKASRGDGGEDEQDELPEVDQNTKKSLRQRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom
IPR016447Translocation_assoc_membrane
IPR013599TRAM1
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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