Tk11158, Tk11158 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11158
Unique NameTk11158
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length710
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 230..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..165
NoneNo IPR availablePANTHERPTHR44028:SF3SUBFAMILY NOT NAMEDcoord: 17..141
coord: 164..709
NoneNo IPR availablePANTHERPTHR44028FAMILY NOT NAMEDcoord: 17..141
coord: 164..709
NoneNo IPR availableCDDcd16587RING-HC_TRIM32_C-VIIcoord: 26..75
e-value: 3.22969E-22
score: 87.8574
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 22..82
NoneNo IPR availableSUPERFAMILY57845B-box zinc-binding domaincoord: 110..141
NoneNo IPR availableSUPERFAMILY101898NHL repeatcoord: 455..709
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 27..74
e-value: 2.8E-4
score: 30.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 26..75
e-value: 1.6E-6
score: 28.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 27..75
score: 11.516
IPR001298Filamin/ABP280 repeatSMARTSM00557flmn_3coord: 342..439
e-value: 5.7E-8
score: 42.5
IPR001258NHL repeatPFAMPF01436NHLcoord: 544..571
e-value: 2.2E-4
score: 21.0
IPR017868Filamin/ABP280 repeat-likePFAMPF00630Filamincoord: 363..431
e-value: 1.1E-8
score: 35.7
IPR017868Filamin/ABP280 repeat-likePROSITEPS50194FILAMIN_REPEATcoord: 366..436
score: 14.15
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 439..581
e-value: 1.2E-28
score: 102.2
coord: 582..709
e-value: 2.2E-22
score: 81.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 344..438
e-value: 4.8E-15
score: 57.6
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 110..140
e-value: 5.9E-6
score: 26.2
IPR000315B-box-type zinc fingerCDDcd00021BBOXcoord: 110..134
e-value: 0.00231742
score: 34.1852
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 15..111
e-value: 1.5E-16
score: 61.6
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 46..55
IPR013017NHL repeat, subgroupPROSITEPS51125NHLcoord: 533..574
score: 11.904
IPR013017NHL repeat, subgroupPROSITEPS51125NHLcoord: 578..618
score: 11.781
IPR013017NHL repeat, subgroupPROSITEPS51125NHLcoord: 681..710
score: 4.749
IPR013017NHL repeat, subgroupPROSITEPS51125NHLcoord: 443..486
score: 10.198
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 343..436

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold259_size234575-snap-gene-1.18-mRNA-1maker-scaffold259_size234575-snap-gene-1.18-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11158 ID=Tk11158|Name=Tk11158|organism=Tigriopus kingsejongensis|type=polypeptide|length=710bp
MMTSMSSNLVETVSIDYEDFNESFLTCGTCLCMYDGGEHTPKLLPCSHTV
CLQCLDRIVATFARDTGQFRCPICRELITIPRGGVQALPPSFLVNQLLDL
MARQRREIIPKCSIHQTQELLFCETCDTVFCTSCIGGSHASSDDPSGGIN
GSVSGGGVNGTPSHTNNVDHTVIPFSIAIKRMSEILIYKANECRAKLNEA
NDVVHEEIHQLDHNTDTAFEAINSHFQNVLDSIEKKRQDVLANVKITRDE
KKKVLEDQQQIIQAEKCKVDSDVQAMRQQVEVRNITKKISDLNCKLDTVS
TLSDPRENSYIQYLVPGDYDDTLHKIIESLDSLGKIKTSKTFPSLCRATM
ETAIAHLEMRARVTNIDYNGAMQQHGGDPVVAEVVDAQGEKLDVTVSDND
DGTYDLHFTPQRAGTFCLKVLIFNRPIKDCPLFFDVSEHNPPVISFGSQG
AKEKGFRQPCNVTVDAQNNVFVIDTGNSRIKKLTPNLDYEDHILNEGLEG
RSVTGICIGPNQESLMVINWRSKTVTEINALNGQTVSSFTHDNFVEPVDL
AVDGEGHILVADTGVGSVLVFDYSGELLRSIGSKGSGKGQFKDISAVCIA
PSGEIVVADSRIQVFTPDGKFQREIYPQGKGKGRYGGLTCDTNGFLMATR
TEKAKSFIQVFKFASGDLYSTIGSEGCRMKRPTGIAVMENERHLVVVDIG
KDCVRKYRYF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR001298Filamin/ABP280_rpt
IPR001258NHL_repeat
IPR017868Filamin/ABP280_repeat-like
IPR0110426-blade_b-propeller_TolB-like
IPR013783Ig-like_fold
IPR000315Znf_B-box
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR013017NHL_repeat_subgr
IPR014756Ig_E-set
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
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