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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 181..205 |
None | No IPR available | GENE3D | 1.10.287.70 | | coord: 602..657 e-value: 2.6E-7 score: 32.8 |
None | No IPR available | GENE3D | 1.10.287.70 | | coord: 105..189 e-value: 2.0E-12 score: 48.9 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 326..340 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 326..350 |
None | No IPR available | PANTHER | PTHR10037:SF274 | SODIUM CHANNEL PROTEIN PARA | coord: 16..645 |
None | No IPR available | PANTHER | PTHR10037 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM | coord: 16..645 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 601..628 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 629..676 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 185..491 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..33 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 158..184 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 523..541 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 34..53 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 582..600 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 561..581 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 542..560 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 512..522 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 54..157 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 492..511 |
None | No IPR available | SUPERFAMILY | 81324 | Voltage-gated potassium channels | coord: 12..56 coord: 119..186 |
None | No IPR available | SUPERFAMILY | 81324 | Voltage-gated potassium channels | coord: 493..638 |
None | No IPR available | TMHMM | TMhelix | | coord: 158..180 |
None | No IPR available | TMHMM | TMhelix | | coord: 31..53 |
None | No IPR available | TMHMM | TMhelix | | coord: 609..631 |
IPR005821 | Ion transport domain | PFAM | PF00520 | Ion_trans | coord: 493..640 e-value: 3.7E-37 score: 127.8 coord: 16..189 e-value: 2.3E-33 score: 115.4 |
IPR027359 | Voltage-dependent channel domain superfamily | GENE3D | 1.20.120.350 | | coord: 483..601 e-value: 6.7E-31 score: 108.8 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11168 ID=Tk11168|Name=Tk11168|organism=Tigriopus kingsejongensis|type=polypeptide|length=676bp MQWFVSHHSLLLSSLGLKTIINALLNAVKQLAEVMTLTIFCLMVFALFAL QVYMGQLRNKCVLDWTDVDVGNWTEWILDPDNWHYNSRGPELCGNSSGAK NCPHGYICLPNVGDNPNFGYTSFDNLLWSMLTTFQLITLDYWENVYNMIV ATGGPIHVIFFTIVVFFGSFYLINLMLAVVAMSYEEEAEANNAERAKEAE EAAANATRVPQEEECTIRTNPPIFHVQGKAGTVSISEDMCGNCQKKASLE ILPQSGPEADGRLGNGVTEHGQNGASNGASCAAKGHHMPNRSGAGDEGSP FAKKLDKSYVVIKAKQVGNEIRQVDLEPHGDADPTFLESRHKHRTHPRST LEAKFNLRVPNPSVSSTSQISDDPRNLLSPPMLERALFDQSSASNYSSAD ESIRSSINDSGVFNDDPSLGEDKLRVQIPFTTDKGEIINCGNVKRPSKID IPFVVSIETANDRNCPSCRKYCLGYNIWLRFQNTLFVIVHDMLFDATVTL CIILNTAFLAAEHHGMSEDLKHVLSIGNKVFTSFFTLEAVLKLLCLSKEY FASGWNIFDLVIVIGSLIDLSVESVNGISVLRGMRLMRVLKLAQSWTTMK VLLSIIISTLGALGNLTFLLIIVIYIFAVLGMQLFGKTYTAENFYPDPVP SLQNMFGLQCPPPRPQFIDFLPLHAD back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
GO:0006811 | ion transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0005216 | ion channel activity |
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
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