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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | PRINTS | PR00180 | CRETINALDHBP | coord: 109..133
score: 30.0
coord: 186..207
score: 29.55
coord: 219..238
score: 37.5
coord: 60..82
score: 32.61
coord: 252..261
score: 62.5 |
| None | No IPR available | GENE3D | 1.10.8.20 | | coord: 8..87
e-value: 5.7E-11
score: 44.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 285..303 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 285..319 |
| None | No IPR available | PANTHER | PTHR10174:SF130 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-LIKE | coord: 17..301 |
| None | No IPR available | PANTHER | PTHR10174 | RETINALDEHYDE BINDING PROTEIN-RELATED | coord: 17..301 |
| IPR001251 | CRAL-TRIO lipid binding domain | SMART | SM00516 | sec14_4 | coord: 100..263
e-value: 4.1E-15
score: 66.2 |
| IPR001251 | CRAL-TRIO lipid binding domain | PFAM | PF00650 | CRAL_TRIO | coord: 113..261
e-value: 8.0E-30
score: 103.6 |
| IPR001251 | CRAL-TRIO lipid binding domain | PROSITE | PS50191 | CRAL_TRIO | coord: 99..266
score: 13.876 |
| IPR001251 | CRAL-TRIO lipid binding domain | CDD | cd00170 | SEC14 | coord: 104..261
e-value: 1.2441E-29
score: 108.627 |
| IPR011074 | CRAL/TRIO, N-terminal domain | SMART | SM01100 | CRAL_TRIO_N_2 | coord: 57..82
e-value: 6.8E-4
score: 28.9 |
| IPR036865 | CRAL-TRIO lipid binding domain superfamily | GENE3D | 3.40.525.10 | | coord: 90..290
e-value: 8.2E-47
score: 161.1 |
| IPR036865 | CRAL-TRIO lipid binding domain superfamily | SUPERFAMILY | 52087 | CRAL/TRIO domain | coord: 104..286 |
| IPR036273 | CRAL/TRIO, N-terminal domain superfamily | SUPERFAMILY | 46938 | CRAL/TRIO N-terminal domain | coord: 20..98 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11196 ID=Tk11196|Name=Tk11196|organism=Tigriopus kingsejongensis|type=polypeptide|length=319bp
LICAKMPELPGVFDANEMARVAKEELNEDPKRLKADIKAIQDWIKKQPHL
NKSIRTDDEHILAFLRGCKFSLERTKEKIDTYNACKTACPEWFQDWDPMD
PMVQEFLTLGVNVPLRGFDKHGRRVIIMQGSVTDPKKHTISDQMRYSMMV
SELLQDEMDQSSVTGFVGVQDMLGMTLGHVTQFSPALGKKAMTIWQDAYP
QRPKGMHFMNMPPVMEGIFGMMKSFAKDKMKDRLIVHPKGDLSLLHEAVG
TDVLPKEFGGTNGTLEDHIADFKTKMEARRKWFAQQSEFKSNEKKRPGKT
RTHSDLFGMEGSFRQLSFD back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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