Tk11200, Tk11200 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11200
Unique NameTk11200
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length477
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002316Proline-tRNA ligase, class IIaPRINTSPR01046TRNASYNTHPROcoord: 19..37
score: 27.1
coord: 55..66
score: 52.47
coord: 95..106
score: 53.09
coord: 85..93
score: 58.85
IPR026120Transmembrane protein 11PFAMPF14972Mito_morph_regcoord: 385..474
e-value: 3.3E-16
score: 59.2
IPR036621Anticodon-binding domain superfamilyGENE3D3.40.50.800coord: 263..381
e-value: 1.6E-16
score: 61.9
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)PFAMPF00587tRNA-synt_2bcoord: 46..258
e-value: 1.0E-31
score: 110.2
NoneNo IPR availableGENE3D3.30.930.10coord: 1..262
e-value: 4.0E-89
score: 300.8
NoneNo IPR availablePANTHERPTHR42753FAMILY NOT NAMEDcoord: 3..364
NoneNo IPR availablePANTHERPTHR42753:SF2PROLINE--TRNA LIGASE, MITOCHONDRIAL-RELATEDcoord: 3..364
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..453
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 454..472
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 473..477
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 266..379
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 3..280
IPR004154Anticodon-bindingPFAMPF03129HGTP_anticodoncoord: 278..376
e-value: 2.2E-7
score: 30.9
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 1..275
score: 16.11
IPR033730Prokaryote proline-tRNA ligase core domainCDDcd00779ProRS_core_prokcoord: 1..258
e-value: 3.61391E-115
score: 337.241

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold263_size232787-snap-gene-0.11-mRNA-1maker-scaffold263_size232787-snap-gene-0.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11200 ID=Tk11200|Name=Tk11200|organism=Tigriopus kingsejongensis|type=polypeptide|length=477bp
LGKLNNLIDSLMMKYGCQKIQMPSLTPGYLWKQTKRWNSMGQELVKLKDR
HDRDLVLSPTHEEAITSLVAQLDLSYKQTPLKLYQITNKVRDEMRPKFGL
IRSREFLMKDLYSFDCDEASAHKTYKSINEAYKEFFDLLEVPFVKVQGDS
GEIGGDLSHEYHFTSDVGQDSLLVCDVCHDGKNVEVDQLNSNLGCAICGG
TNTFVYKKGIEVGHTFMLGDKYSKVLKATIRANSGKPVISQMGCYGLGVS
RILAASVECLKTTQTELRWPKRIVPFTVAILAPKEGSKEYARMQSALDLY
DRLNAKLCPDDVILDDRSNLTIGGKLREAKKTGFRFIVIFGKDILNSEET
QVELLDTDSNSMSKLSLSDLEACLNEKLGRSSVSFSDWPALPLPFGLTSV
FCWGLHRLSWESDPCSQYQVETKRRHLSRTSLNTVTSLPQASGPIILVKS
PSRAGHFLTPCLALSAIAYAIWKLKST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002316Pro-tRNA-ligase_IIa
IPR026120TMEM11
IPR036621Anticodon-bd_dom_sf
IPR002314aa-tRNA-synt_IIb
IPR004154Anticodon-bd
IPR006195aa-tRNA-synth_II
IPR033730ProRS_core_prok
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0031305integral component of mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004827proline-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006433prolyl-tRNA aminoacylation
GO:0007005mitochondrion organization
GO:0006418tRNA aminoacylation for protein translation
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