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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR008160 | Collagen triple helix repeat | PFAM | PF01391 | Collagen | coord: 315..372
e-value: 9.6E-8
score: 31.6
coord: 405..463
e-value: 3.5E-10
score: 39.4 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | PFAM | PF00090 | TSP_1 | coord: 280..313
e-value: 0.033
score: 14.3 |
| IPR000884 | Thrombospondin type-1 (TSP1) repeat | PROSITE | PS50092 | TSP1 | coord: 212..314
score: 9.282 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 405..419 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 477..493 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 317..494 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 319..333 |
| None | No IPR available | PANTHER | PTHR24023 | FAMILY NOT NAMED | coord: 315..463 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11236 ID=Tk11236|Name=Tk11236|organism=Tigriopus kingsejongensis|type=polypeptide|length=564bp
LEESNTPEPLWLWSMLNLIEAPRAARKFDHEKLGRGEVDSLEQDNYEFGA
WSPVAKERKFEEALSLQSDTDSNVKPHNISFGGPVELSEAATQRITYVGS
RNTASSKSDDDISKIDYFPEPSGAGDQARDKSYEDLTREARDSPHHHSHH
DGHPPAPPTHGSTPPAECFIETPCTRSCGDGFKLLLPNPNGYGCYGASLQ
VHPCNDKPCPIDCHWSAWSHWTACSKTGKRRRREAEAEAESKAEAEPDNG
YAAPVGGHPHQPHQPHQPHHPHPPASGICTQSRQRIVEVPPANYGKECKG
DYAETRFCQSYECAGPEGPPGAPGYPGPQGPGGLPGQPGKDGVPGRTGPQ
GPVGDPGERGPQGEKGIQGINGPQGPPGAPGPRGRHGEKGGPGPDGKIGE
PGPLGQPGEPGPAGPRGPPGLNGKPGSNGPMGSPGQLGLQGIPGNAGSRG
VPGPKGEPGHPAEPVHHPQHHYTYNPEPEPYHPPPPPPPTHGYGAPTLLN
TVQHLNPAGFFPHKLKRESYNGFHDGTLSAERRQSTEENVEEGFIHSESI
ATGLVESEQPLKTD back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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