Tk11248, Tk11248 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11248
Unique NameTk11248
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length258
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availableGENE3D3.30.450.20coord: 18..133
e-value: 3.7E-36
score: 125.7
NoneNo IPR availablePANTHERPTHR10217VOLTAGE AND LIGAND GATED POTASSIUM CHANNELcoord: 19..258
NoneNo IPR availablePANTHERPTHR10217:SF529EAG-LIKE K + CHANNEL, ISOFORM Acoord: 19..258
IPR001610PAC motifSMARTSM00086pac_2coord: 87..129
e-value: 1.1E-6
score: 38.3
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 35..131
e-value: 1.7E-12
score: 45.5
IPR000014PAS domainPFAMPF13426PAS_9coord: 33..127
e-value: 1.9E-20
score: 73.0
IPR000014PAS domainPROSITEPS50112PAScoord: 35..83
score: 9.653
IPR000014PAS domainCDDcd00130PAScoord: 35..126
e-value: 6.28333E-12
score: 58.4135
IPR000700PAS-associated, C-terminalPROSITEPS50113PACcoord: 86..138
score: 12.474
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 33..127

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold414_size178625-snap-gene-0.37-mRNA-1maker-scaffold414_size178625-snap-gene-0.37-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11248 ID=Tk11248|Name=Tk11248|organism=Tigriopus kingsejongensis|type=polypeptide|length=258bp
MRLKILVNVANSKFVDQEDSNFVLGNAQVPSAYPIVYCSDGFCELTGYPR
AQIMQKGCACKFLYGEDTDEDKKKSIENSLQEKSELKAEVKFYKKSGTAF
WCLLDIVPIKNEKREVVLFLASHKDITSSKQFSGLNHLPLPGGIDDLHGT
DNELHPCDPNGNLDPEAPSNYNYGRRRSRAVLYQLSGHYKTDKSKKIHSK
LSTNSLLSPPATNIQPLPEYKTALAKKPRWVLSHYGMGKTCWDILVLMAT
IYVAIAVP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001610PAC
IPR000014PAS
IPR000700PAS-assoc_C
IPR035965PAS-like_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
Vocabulary: Molecular Function
TermDefinition
GO:0000155phosphorelay sensor kinase activity
Add to Basket