Tk11252, Tk11252 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11252
Unique NameTk11252
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length716
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 31..46
score: 47.48
coord: 13..29
score: 25.68
coord: 68..76
score: 51.34
coord: 76..84
score: 48.57
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399c4goldcoord: 10..87
e-value: 3.3E-19
score: 79.8
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 12..85
e-value: 1.6E-16
score: 60.4
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 13..41
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 10..91
score: 17.557
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 3..114
e-value: 1.3E-21
score: 78.5
NoneNo IPR availablePANTHERPTHR24082NUCLEAR HORMONE RECEPTORcoord: 11..279
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 11..97

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold550_size154339-processed-gene-0.5-mRNA-1snap_masked-scaffold550_size154339-processed-gene-0.5-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11252 ID=Tk11252|Name=Tk11252|organism=Tigriopus kingsejongensis|type=polypeptide|length=716bp
MDGDSDPKRSTICGICGAQTGNFHLNYGASTCLSCRAFFRRTVQRDESPK
FLCKGDGKNPCEINERNRKKCKRCRFQACLTAGMKTDQVMSSEVKQTWFR
KMYKKKAKDQVPPETPEPRSVNPRRAKYVSMVSEEPSECSLMSLPMIGGC
SSNPLDSGFMSTFTTNGGHDDDNSLNVFGESLKVEWAILVSGLNFHPVLV
QAATSSPQDQIQVTKTMVKDHAELIESAWVQFCRCNPDFCSLSPRDQSTL
LVQNKRMFTTAVLSRFFASSMRDEQLEWLFLGQEAPKAWALDGCGHFSFT
HWNTHQGLILDVPTLMQTVHLMELICSFPMPVKHIGILAYHCLFYVSTSS
DHLFENPDAIYNFSLKTTSLAPLVQVDPNQLQSHVENLKDLSRQVSAWNW
DTIEGSIPHSPTQSYGDLEENILQAEFHTMDQIFKEVPLGQDVVEELISY
AMDVPVSKGFMRRAMMTWKQRFKLIMCQHQEFQTLPDVDQAILVEKTCLP
TFGVAKLWSENLPTVRAQMEFALGVSDISFLMERISPILPSLTPKKLTVD
GLNKSAKLVDKKTMDRFDTLKNGLKYLVSDNEFYKITFLMTMFLPAAKSH
AGHAIGQLSSKYLHILIRRSKHLSLADEAAINQSIKLIAEIGELMKVEWA
ILVSGLNFHPVLVQAATSGPQDQIQVTKTMVKDHAELIESACLTSVRFPE
SGLGPDQEQGGQHTGI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001628Znf_hrmn_rcpt
IPR013088Znf_NHR/GATA
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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