Tk11266, Tk11266 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11266
Unique NameTk11266
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length230
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004579ERCC1/RAD10/SWI10 familyTIGRFAMTIGR00597TIGR00597coord: 23..134
e-value: 1.1E-39
score: 132.7
IPR004579ERCC1/RAD10/SWI10 familyPFAMPF03834Rad10coord: 24..137
e-value: 9.1E-42
score: 141.6
IPR004579ERCC1/RAD10/SWI10 familyPANTHERPTHR12749EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1coord: 15..223
IPR004579ERCC1/RAD10/SWI10 familyPRODOMPD013585coord: 24..150
e-value: 4.0E-42
score: 431.0
NoneNo IPR availableGENE3D3.40.50.10130coord: 22..137
e-value: 1.2E-42
score: 146.2
NoneNo IPR availablePFAMPF14520HHH_5coord: 161..209
e-value: 2.7E-8
score: 34.2
NoneNo IPR availableGENE3D1.10.150.20coord: 138..225
e-value: 9.7E-32
score: 110.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..28
IPR010994RuvA domain 2-likeSUPERFAMILY47781RuvA domain 2-likecoord: 146..217
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 23..150

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold526_size146413-processed-gene-0.13-mRNA-1snap_masked-scaffold526_size146413-processed-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11266 ID=Tk11266|Name=Tk11266|organism=Tigriopus kingsejongensis|type=polypeptide|length=230bp
MSVAGAPVGPGSVTSAASRPTGSIEVHSRQRGNPLLKSLRSVPWEFSEQI
TADYALGPRSCATFLSVRYHTLNPDYIHDRLKELGPSFELRILLVQVDVK
EPHVALKQLMRIAILAELTLMLAWSPEEAGKILETYKQFEHKPPDLIMEK
HQPDHHARLVEALTSVKSVNKSDAATLLAAFGTLARVTQASIEDLSMCPG
FGPQKAQRLHKVFNETFQRHARRQSPPPIP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004579ERCC1/RAD10/SWI10
IPR010994RuvA_2-like
IPR011335Restrct_endonuc-II-like
Vocabulary: Molecular Function
TermDefinition
GO:0004519endonuclease activity
GO:0003684damaged DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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