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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002347 | Short-chain dehydrogenase/reductase SDR | PRINTS | PR00081 | GDHRDH | coord: 150..167
score: 40.83
coord: 265..281
score: 38.82
coord: 295..314
score: 32.03
coord: 226..237
score: 54.61
coord: 320..337
score: 23.01 |
| IPR002347 | Short-chain dehydrogenase/reductase SDR | PRINTS | PR00080 | SDRFAMILY | coord: 271..279
score: 58.99
coord: 226..237
score: 51.96
coord: 295..314
score: 31.95 |
| IPR002347 | Short-chain dehydrogenase/reductase SDR | PFAM | PF00106 | adh_short | coord: 149..339
e-value: 3.5E-35
score: 121.2 |
| None | No IPR available | GENE3D | 3.40.50.720 | | coord: 147..382
e-value: 9.0E-51
score: 174.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 51..108 |
| None | No IPR available | PANTHER | PTHR44229 | FAMILY NOT NAMED | coord: 147..384 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 439..446 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 417..438 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..416 |
| None | No IPR available | TMHMM | TMhelix | | coord: 419..441 |
| IPR020904 | Short-chain dehydrogenase/reductase, conserved site | PROSITE | PS00061 | ADH_SHORT | coord: 282..310 |
| IPR036291 | NAD(P)-binding domain superfamily | SUPERFAMILY | 51735 | NAD(P)-binding Rossmann-fold domains | coord: 147..382 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11268 ID=Tk11268|Name=Tk11268|organism=Tigriopus kingsejongensis|type=polypeptide|length=446bp
MQSASTPERQSASTPQRQSASTPERQSPSASTLRDAVSLCSTLRDAVSLH
APRCNLPPRPRCKPSPLQDASHPHSEMQAIPTPRCKPSPLRDASHPHSEM
QAIPTPRCKPSPLRDANHPHSEMQAIPTPRCKEQALVCLEFAFGHSTGNV
AIVTGGSQGFGKEFTRQLLKHGAKVCLSDVNSDIGLATETELKKEFGQEN
VCFVKADVTSDEDWTNLWNKTEEKLGAVSILVNNAGVGPKTGWEKNVDIM
VKGVAKGTFLGLKRMGKNMSGRIINISSFAGITSGLESSIETCGYPMAKH
AVISLTRSFAVANPAPFQKYGVKSYAICPWFADTQLLRSELTEGWTRQAR
STGTRVLTSEEVGETLITILKKDKNGACFFVFPDIPLVEFPNSNEALLAF
AIVAGQVLTKLGYKTDILPWPMVLSFLFGLFVIFYLFLELLKCMIW back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0016491 | oxidoreductase activity |
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