|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR014041 | ESCRT-II complex, Vps25 subunit, N-terminal winged helix | GENE3D | 1.10.10.570 | | coord: 99..195 e-value: 1.9E-29 score: 104.0 |
IPR036388 | Winged helix-like DNA-binding domain superfamily | GENE3D | 1.10.10.10 | | coord: 196..268 e-value: 6.1E-22 score: 79.1 |
IPR008570 | ESCRT-II complex, Vps25 subunit | PFAM | PF05871 | ESCRT-II | coord: 106..239 e-value: 3.8E-42 score: 143.7 |
IPR008570 | ESCRT-II complex, Vps25 subunit | PANTHER | PTHR13149 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 | coord: 101..268 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..43 |
IPR036390 | Winged helix DNA-binding domain superfamily | SUPERFAMILY | 46785 | "Winged helix" DNA-binding domain | coord: 198..264 |
IPR036390 | Winged helix DNA-binding domain superfamily | SUPERFAMILY | 46785 | "Winged helix" DNA-binding domain | coord: 102..203 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11295 ID=Tk11295|Name=Tk11295|organism=Tigriopus kingsejongensis|type=polypeptide|length=268bp MPSWRPESDPPLTLAGPAQAHLAGLAGPESPSDHVESSLGRAASRSGLTE VEVHLLSHRVISGTCRERSPRLVAHRSGLDTPAVVRLTVALAAPVGGRVM SDWPWQHSFPPFFTLQPHEPTRVKQLAAWRALILDYCQARKLSRIEVAEI GGSELCHNRELQRRLSPADLLTVLEDLRAHGHLEWATTARQRAHIYWRRP EEWGSLIHSWSQAQGLKLCTLFELGQGDDTREEAFHGLDTELLIKALQTL EVKGQAELFPDRAGVKFF back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0071985 | multivesicular body sorting pathway |
Vocabulary: Cellular Component
Term | Definition |
GO:0000814 | ESCRT II complex |
|