Tk11295, Tk11295 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11295
Unique NameTk11295
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length268
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014041ESCRT-II complex, Vps25 subunit, N-terminal winged helixGENE3D1.10.10.570coord: 99..195
e-value: 1.9E-29
score: 104.0
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 196..268
e-value: 6.1E-22
score: 79.1
IPR008570ESCRT-II complex, Vps25 subunitPFAMPF05871ESCRT-IIcoord: 106..239
e-value: 3.8E-42
score: 143.7
IPR008570ESCRT-II complex, Vps25 subunitPANTHERPTHR13149VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25coord: 101..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 198..264
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 102..203

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold14_size734282-processed-gene-2.17-mRNA-1snap_masked-scaffold14_size734282-processed-gene-2.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11295 ID=Tk11295|Name=Tk11295|organism=Tigriopus kingsejongensis|type=polypeptide|length=268bp
MPSWRPESDPPLTLAGPAQAHLAGLAGPESPSDHVESSLGRAASRSGLTE
VEVHLLSHRVISGTCRERSPRLVAHRSGLDTPAVVRLTVALAAPVGGRVM
SDWPWQHSFPPFFTLQPHEPTRVKQLAAWRALILDYCQARKLSRIEVAEI
GGSELCHNRELQRRLSPADLLTVLEDLRAHGHLEWATTARQRAHIYWRRP
EEWGSLIHSWSQAQGLKLCTLFELGQGDDTREEAFHGLDTELLIKALQTL
EVKGQAELFPDRAGVKFF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014041ESCRT-II_cplx_Vps25-sub_N
IPR036388WH-like_DNA-bd_sf
IPR008570ESCRT-II_cplx_Vps25-sub
IPR036390WH_DNA-bd_sf
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Add to Basket