Tk11309, Tk11309 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11309
Unique NameTk11309
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length701
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 697..701
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 680..701
NoneNo IPR availablePANTHERPTHR24082NUCLEAR HORMONE RECEPTORcoord: 64..356
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 64..146
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399c4goldcoord: 62..136
e-value: 4.9E-22
score: 89.2
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 64..134
e-value: 1.8E-15
score: 57.0
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 65..92
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 62..140
score: 16.108
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 62..158
e-value: 2.8E-21
score: 77.5

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold14_size734282-processed-gene-6.3-mRNA-1snap_masked-scaffold14_size734282-processed-gene-6.3-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11309 ID=Tk11309|Name=Tk11309|organism=Tigriopus kingsejongensis|type=polypeptide|length=701bp
MSAPDSFPAWLNQIRMNLPNREELSFRTVLALPQASSTGLVWTILSSKEA
SPSFLFPEAPTQAKCPICKSTEPHFLHYGGISCYSCRAFFRRAHQKTRTP
QFTCLSGGSCEINVLTRKDCRKCRYDLCLKVGMRPQLVLDGSQKRRRFHG
MILNRSLGSHEGQGIQSSSGEGSPDLRMEVPTEDGDKAEMIQEIVQEFSS
TLSEMDLAFDFVQEMAEFHQREATRLNRDHFKAYFNTIGSHFQQFARNNE
YFKTFPVDIQGYILAKNTGLFQAYILVRYFGSASGNEQLSWIFGTHCPMN
YSPQPYFYRSMDQLMVALGIPSTSSLPEADQRRIEVISAMGLSPERLGIV
AHLILFHLDLNLDTFPGQFSLRKAFKLSVELLKYNQNSLEEDQVFNFIKD
LIQLRSRFEIPTAQATLIQVAFDFELWQVISIIEGGILFFAQVSFRLGEI
QIGGHKLGSLILPLDQHPLGCLEDPLGVFQLGGEGMGLGMNGRVGLLVLL
VRVIVLHFRDHQVDGLTLIRELARLRRGFGAQGLFQINVQRALQIPARSE
HTFVTEGLKPTTDYIKIQRPSRSLMSYLGNLGTSWAGLVNLLFELLVSCE
KCGRLAMDGLLELSCESESNWLHFSLGGCPWDVAALGLVGAPGCPPERAE
DHITARQIGRGSGDESDEAQFVEQKVLLGGGEAQEQEGEILEDVQPQSDL
S
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001628Znf_hrmn_rcpt
IPR013088Znf_NHR/GATA
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
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