Tk11323, Tk11323 (polypeptide) Tigriopus kingsejongensis

Overview


Name	Tk11323
Unique Name	Tk11323
Type	polypeptide
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length	810

Associated RNAi Experiments

Nothing found

InterPro

Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 481..504 e-value: 4.5 score: 16.1 coord: 457..480 e-value: 48.0 score: 7.7 coord: 410..432 e-value: 2.6 score: 17.0 coord: 317..339 e-value: 10.0 score: 13.2 coord: 575..597 e-value: 0.99 score: 18.4 coord: 340..362 e-value: 8.0 score: 14.0 coord: 386..409 e-value: 0.024 score: 23.8 coord: 363..385 e-value: 43.0 score: 8.1 coord: 271..293 e-value: 5.3 score: 15.6 coord: 644..667 e-value: 0.27 score: 20.3 coord: 621..643 e-value: 2.9 score: 16.9 coord: 598..620 e-value: 22.0 score: 10.4 coord: 531..552 e-value: 250.0 score: 1.8 coord: 294..316 e-value: 2.5 score: 17.1
None	No IPR available	SMART	SM00364	LRR_bac_2	coord: 621..640 e-value: 98.0 score: 6.2 coord: 644..663 e-value: 30.0 score: 10.0 coord: 575..594 e-value: 38.0 score: 9.3 coord: 409..428 e-value: 29.0 score: 10.2 coord: 481..500 e-value: 600.0 score: 0.2 coord: 294..313 e-value: 11.0 score: 13.5 coord: 667..688 e-value: 220.0 score: 3.5 coord: 529..548 e-value: 340.0 score: 2.0 coord: 363..382 e-value: 62.0 score: 7.7 coord: 598..617 e-value: 500.0 score: 0.8 coord: 457..476 e-value: 41.0 score: 9.1 coord: 271..290 e-value: 47.0 score: 8.6
None	No IPR available	SMART	SM00365	LRR_sd22_2	coord: 575..597 e-value: 180.0 score: 5.4 coord: 644..672 e-value: 170.0 score: 5.4 coord: 271..292 e-value: 110.0 score: 7.2 coord: 294..316 e-value: 380.0 score: 2.7 coord: 340..365 e-value: 24.0 score: 12.5 coord: 386..401 e-value: 750.0 score: 0.3 coord: 409..434 e-value: 300.0 score: 3.5 coord: 598..616 e-value: 250.0 score: 4.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..137
None	No IPR available	PANTHER	PTHR44179	FAMILY NOT NAMED	coord: 208..722
None	No IPR available	PANTHER	PTHR44179:SF2	LEUCINE-RICH REPEAT PROTEIN SHOC-2	coord: 208..722
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 480..714
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 249..522
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 342..399 e-value: 1.6E-7 score: 30.9 coord: 622..678 e-value: 1.1E-9 score: 37.9 coord: 292..330 e-value: 1.0E-8 score: 34.7
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 434..454 score: 4.601
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 296..318 score: 7.997
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 554..575 score: 5.779
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 483..504 score: 5.841
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 388..409 score: 6.31
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 669..691 score: 5.895
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 273..294 score: 5.255
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 646..667 score: 5.794
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 319..340 score: 7.404
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 365..386 score: 6.38
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 531..552 score: 5.794
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 459..480 score: 5.771
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 623..644 score: 6.488
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 577..598 score: 7.704
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 411..432 score: 8.143
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 342..363 score: 7.08
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 600..621 score: 7.165
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 403..500 e-value: 6.8E-24 score: 86.1 coord: 502..609 e-value: 4.1E-24 score: 86.8 coord: 610..714 e-value: 6.7E-25 score: 89.4
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 183..402 e-value: 2.7E-45 score: 156.2

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Tigriopus kinsejongensis Genome annotation	2018-02-12
InterProScan T. kingsejongensis	2018-08-30

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
maker-scaffold195_size270011-snap-gene-0.17-mRNA-1	maker-scaffold195_size270011-snap-gene-0.17-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Tk11323 ID=Tk11323|Name=Tk11323|organism=Tigriopus kingsejongensis|type=polypeptide|length=810bp
RPIGQASASRSPRKPTLGHARPSAKARGPDRVSEPARLRASRETRATFRA
AAASPLTRIPGRTCRRAGGRDRALAARIDPAWLRGPECAPLRPWAPASLS
PERPAARSRSLMKRANRPKNLSGGAGQQSSGEGETAAELHQRALAGVSHY
ADQIPDSPDYNAAAETVSIASTMPELQSSTDASMASLTSSFKDMMKKEKK
NAIYDTSDAKKVTVEIDGKKKRTGGQNSKKSVVTTNLDLPREFAKCKEEN
KTRLDLAKSNISHVPASIKELTQLKELYVYSNRLAILPNEVGGLANLTTL
SLSENVLTSLPDSLANLRQLRVLDLRHNRFPEIPPVVYTLTSLTTLYLRF
NRIKEVGNEIGNLSRLANLSIRENNITSLPPSVGNLTRLVTFDMSYNQLE
TIPPEIGECTQLTTLDLQHNKLASLPDSIGNLVYLTRLGLRYNRLSFSSI
PCSLAKCNALEQFNVENNLISSLPEGLLSSLENLTQISLSRNQFSNFPPG
GPAQFINTVVLNMEHNQCDRIPYGIFSRANHLQKLNMKENMLTSLPIDIG
TWHSVVELNFGTNQIQKLPDDIACLANLEVLVLSNNLLRKLPSNIGQLQK
LRILELEENKLDNIPNEIGRLRELQKLILQSNNLTQLPRAIGQLSKLEYL
SVGENLLSFLPEEIGSLESLESLYINDNPHLQSLPFELALCSKLEIMSIE
NCPLNRIPGEIVAGGPSLVIQSYQDWEASPSNAHKATHVALNDVARTITG
KSRQDHVQIADLLHLVGLPSFNELAVRALVMETWKAFRSSDGKHGGRNIL
GKIIFPSPRR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

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