Tk11362, Tk11362 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11362
Unique NameTk11362
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length1224
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1030..1050
NoneNo IPR availableGENE3D3.40.50.2300coord: 195..325
e-value: 7.6E-66
score: 224.0
coord: 420..444
e-value: 7.6E-66
score: 224.0
NoneNo IPR availableGENE3D3.40.50.2300coord: 120..194
e-value: 7.6E-66
score: 224.0
coord: 326..419
e-value: 7.6E-66
score: 224.0
NoneNo IPR availableGENE3D1.10.287.70coord: 930..957
e-value: 3.3E-96
score: 324.1
coord: 666..779
e-value: 3.3E-96
score: 324.1
NoneNo IPR availableGENE3D3.40.190.10coord: 780..879
e-value: 3.3E-96
score: 324.1
coord: 656..665
e-value: 3.3E-96
score: 324.1
NoneNo IPR availableGENE3D3.40.190.10coord: 880..929
e-value: 3.3E-96
score: 324.1
coord: 580..655
e-value: 3.3E-96
score: 324.1
NoneNo IPR availablePANTHERPTHR43958:SF4NMDA CLASS GLUTAMATE RECEPTORcoord: 59..990
NoneNo IPR availablePANTHERPTHR43958FAMILY NOT NAMEDcoord: 59..990
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 956..1224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 37..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 775..930
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 680..700
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 931..955
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 25..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 721..739
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 701..720
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 751..774
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..679
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 740..750
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 801..915
coord: 579..683
NoneNo IPR availableTMHMMTMhelixcoord: 19..41
NoneNo IPR availableTMHMMTMhelixcoord: 931..953
NoneNo IPR availableTMHMMTMhelixcoord: 719..737
NoneNo IPR availableTMHMMTMhelixcoord: 752..774
NoneNo IPR availableTMHMMTMhelixcoord: 681..703
IPR001508Ionotropic glutamate receptor, metazoaPRINTSPR00177NMDARECEPTORcoord: 682..707
score: 23.08
coord: 936..960
score: 32.4
coord: 749..776
score: 53.57
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 1141..1174
e-value: 0.0037
score: 26.5
coord: 1175..1208
e-value: 1.4E-6
score: 37.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1175..1208
score: 11.328
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1141..1174
score: 6.726
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainSMARTSM00918Lig_chan_Glu_bd_2coord: 573..626
e-value: 1.2E-8
score: 44.7
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainPFAMPF10613Lig_chan-Glu_bdcoord: 578..664
e-value: 2.1E-25
score: 89.1
IPR001320Ionotropic glutamate receptorSMARTSM00079GluR_14coord: 570..916
e-value: 1.4E-60
score: 217.2
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 680..947
e-value: 4.2E-29
score: 101.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1102..1224
e-value: 2.1E-17
score: 65.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1112..1222
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 1176..1208
e-value: 3.0E-7
score: 29.9
IPR001828Receptor, ligand binding regionPFAMPF01094ANF_receptorcoord: 150..427
e-value: 2.3E-20
score: 72.9
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1141..1208
score: 16.941
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 508..520
coord: 151..445

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold444_size168727-snap-gene-0.32-mRNA-1maker-scaffold444_size168727-snap-gene-0.32-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11362 ID=Tk11362|Name=Tk11362|organism=Tigriopus kingsejongensis|type=polypeptide|length=1224bp
MADGRKRVSSLALFPQGRLIEGSHFLVLLASLCLVFSVLGIDLNARHDAK
NAHRHNFDFGARRNKNRTALSVAVVLPYSMFKEREYKKHILQASLRLSEM
KFLRQFEVSPYLDMVQPIPAPTEVLQKICDHFLAKNTAVILYFTDSESYG
RHSMASQYFMQLAQYVGLPLVSWNADNSAFEHGASRDRLQLQLAPTIKHQ
GTAILSLLDRYSWNYFSIVTGKIAGHHHFHQVMRELVSNRPEGRTKKVIL
DNVIFKEASDLLALSRSEARVFILYSTNPEAVVIMKEAQRLRLTGKAYVW
IVTQSVIGSSLDASRELPVGMLGIHFDTDTTTMIRQIKPAMQVLGHALDS
LGDDMSLSLAEKRSMIQSNVTCDGRGEVKWPKGEMLYKLLRNASILDDDK
NALHEPALEFNKDGSRKAVELKIVNLQFESGNHDGRRWEEIGVWKSWTKP
GALADTEGENPDVGPFLTDALASPATPNISSRNGRLERDKLDESVSFGGG
LDIRDIVWPGMALKPPEGLPDKRFIKVSFLEEDPYVLLTPPTTCGTNKGV
VCQMVDDARLIGVNITQEKTLVNSSFFQCCSGFCVDLLLKFSHDLSFDFQ
MVRVKDGKWGGVSNGKWNGLVAELMSHEADIVMTSLKINSGREKVIDFSV
PFLDTGITILVAKRTGIISPTAFLEPFDTASWMLVALVAIQVAAGFIFFF
EWLSPSGYNMKVQPAEGKFSFLRTLWLVWAVLFQAAVNVDCPRGYTARFM
AHVWAMFALIFLAIYTANLAAFMITREEYSNLSGLEDRRLTNPQSTKPAF
RFGTIPNGATDYVIKNNFPEMHSYMKQFNRSTVKEGFKAIKTDKLDAFIY
DATVLEYLVGQDDECNILTVGSWYAMTGYGVAFPKGSKWIPLFNEYLMSY
RENGDLERMQRFWFTGACEPKKRRRTSSKPLALAQFTSAFILLGLGIVLS
GLLLICEHGYFRYVRPPMRGLRQRNWISLISLSVAQSLRSEPSGSTLCNR
LETLVISHPLPESGAQNGCDGHTSEVRNDLNAARQKIRFLEWELQRLRSH
RLSTQSYSEDSNEPRVDPVVQDQSEGLFLNPLALQPQGKARHRGHLLGKS
ILSDLTVESQRLYKETKFKEVEDMFSTFLKEAVGEKPEIRSQALNNRGHA
KYMQVKFDDALVDFEEAIVLCKTIPAVFYNRGTIRFRMGQHAEALPDFEE
ALKQAPDNEEFQTGRNKCQEAMSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001508Iono_rcpt_met
IPR019734TPR_repeat
IPR019594Glu/Gly-bd
IPR001320Iontro_rcpt
IPR011990TPR-like_helical_dom_sf
IPR001440TPR_1
IPR001828ANF_lig-bd_rcpt
IPR013026TPR-contain_dom
IPR028082Peripla_BP_I
Vocabulary: Molecular Function
TermDefinition
GO:0038023signaling receptor activity
GO:0005216ion channel activity
GO:0005515protein binding
GO:0004970ionotropic glutamate receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
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