Tk11365, Tk11365 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11365
Unique NameTk11365
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length404
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 315..337
e-value: 0.032
score: 23.4
coord: 224..246
e-value: 0.037
score: 23.2
coord: 255..277
e-value: 0.49
score: 19.4
coord: 343..365
e-value: 0.02
score: 24.0
coord: 284..307
e-value: 0.0036
score: 26.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 345..365
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 226..246
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 286..307
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 317..337
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 257..277
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 315..342
score: 11.614
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 224..251
score: 10.242
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 343..370
score: 9.91
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 255..282
score: 8.517
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 284..312
score: 10.762
NoneNo IPR availableGENE3D3.30.160.60coord: 218..283
e-value: 4.4E-9
score: 38.2
coord: 312..373
e-value: 1.3E-13
score: 52.7
NoneNo IPR availableGENE3D3.30.160.60coord: 285..311
e-value: 4.8E-5
score: 25.0
NoneNo IPR availablePFAMPF12874zf-metcoord: 285..305
e-value: 2.3E-5
score: 24.5
NoneNo IPR availableGENE3D3.30.710.10coord: 31..124
e-value: 1.6E-7
score: 33.5
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 315..337
e-value: 0.0037
score: 17.5
coord: 343..365
e-value: 0.0076
score: 16.6
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 225..236
e-value: 0.069
score: 13.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..225
NoneNo IPR availablePANTHERPTHR24409:SF295IP01295P-RELATEDcoord: 209..369
NoneNo IPR availablePANTHERPTHR24409FAMILY NOT NAMEDcoord: 209..369
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 48..120
e-value: 4.6E-8
score: 33.2
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 34..103
score: 11.895
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 252..302
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 311..361
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 48..118

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold444_size168727-processed-gene-0.7-mRNA-1snap_masked-scaffold444_size168727-processed-gene-0.7-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11365 ID=Tk11365|Name=Tk11365|organism=Tigriopus kingsejongensis|type=polypeptide|length=404bp
MAQDTPCHSGDRLALFHALRDFATHGIPSPAWPSDVTVGPGTGDVPPVSA
HLLVLASASPYLRDILLSCPLDEKWVLILPDFSSLSIQTVLQLLYAGTAP
VDMKYNAEILELLNVLEIKCQSLVYFPYIGALPLNVQEPWRVGMPFPTLL
PSRNASSTRTLPPTPSDESGLKQSLSISTVLTKCGTSNEKSHPVVSSQAK
KKSVRCRERSNLGSEGTNKGSQGNRCQVCSKTFESQWRLKRHCLTHDKTS
PGKEYLCQQCGMVFPSYDPYYIHSLRHKPLRDLPTCSLCDKSFATPASLR
SHLKGIHAVEGSQKFPCRICGKIFNYKANMMNHEFRHDDIQPFSCQICPK
RFRRKDQVEEHLHYHDRNSIDEIIDHFNDFKKNGLNCIFRSTSFQELMLR
GMNI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR000210BTB/POZ_dom
IPR036236Znf_C2H2_sf
IPR011333SKP1/BTB/POZ_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
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