Tk11373, Tk11373 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11373
Unique NameTk11373
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length200
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 58..116
e-value: 2.2E-9
score: 47.2
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 60..114
e-value: 2.4E-10
score: 40.3
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 57..116
score: 12.061
NoneNo IPR availableGENE3D3.20.20.80coord: 36..123
e-value: 1.1E-7
score: 33.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..200
NoneNo IPR availablePANTHERPTHR22933UNCHARACTERIZEDcoord: 57..193
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..200
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 27..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..39
score: 0.594
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..45
score: 0.458
IPR036508Chitin binding domain superfamilySUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 57..116

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold444_size168727-snap-gene-0.37-mRNA-1maker-scaffold444_size168727-snap-gene-0.37-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11373 ID=Tk11373|Name=Tk11373|organism=Tigriopus kingsejongensis|type=polypeptide|length=200bp
MHSIRICSVSARRNWAIMASGRMGMWVAVLVHFVCPSSALIDAQADLAPS
AVDLGSDFTCLNRSYGYYADPHSHCHEFHICLGHEDIKWTFLCPNGTIFN
QEYFVCDFAQNVDCDLAKSFYHLNDLFHAESVQQSSSQPPEAEEDTLDPI
FEPAFSVEAKIEVLSIASPSSLGMEKAGPTSKAPSLRSESEEPQAPTLDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
IPR036508Chitin-bd_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
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