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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001478 | PDZ domain | SMART | SM00228 | pdz_new | coord: 52..124
e-value: 7.3E-20
score: 82.0 |
| IPR001478 | PDZ domain | PFAM | PF00595 | PDZ | coord: 53..120
e-value: 3.0E-15
score: 56.2 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 42..124
score: 16.486 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 37..128
e-value: 6.2E-34
score: 117.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 257..327 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 153..167 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 168..183 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 145..350 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 217..238 |
| None | No IPR available | PANTHER | PTHR14191 | PDZ DOMAIN CONTAINING PROTEIN | coord: 26..282 |
| None | No IPR available | CDD | cd00992 | PDZ_signaling | coord: 40..121
e-value: 1.53788E-22
score: 88.0074 |
| IPR031197 | Na(+)/H(+) exchange regulatory cofactor NHERF-2 | PANTHER | PTHR14191:SF4 | NA + /H + EXCHANGE REGULATORY COFACTOR NHE-RF2 | coord: 26..282 |
| IPR036034 | PDZ superfamily | SUPERFAMILY | 50156 | PDZ domain-like | coord: 32..124 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11386 ID=Tk11386|Name=Tk11386|organism=Tigriopus kingsejongensis|type=polypeptide|length=350bp
LVSWIGSQSVGAEPIGALEKDMNQFTMEEEKPLPPNAPRPRMCHVTKWDD
FDGYGFNLHAEKCRPGQFIGQVDEGSPAAKAGLREGDKIIEVNGVNINQE
NHKQVVQRIKATSDETRLLVVDQHADKFYKDNGIVLHGSMENVWCQSSDP
DQKQSSPEDHRQSLEESQPDTSFEVPTVQRSHSATESKHTEDESDSIHSS
GSVPSVENDKRMESNHQVFTKTSAGSSSRGSTPSPSPKPLRSLGGLDLSM
TAAEMRSRIGSKKKRDPRRDDRMDFRRKFEIIETLHHDVYEYEEGQDDGG
KSPDHGVEEDRIKDDREGLENAEPSDSYHDTTKTATHGPHFGGEALGGQS back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0032947 | protein-containing complex scaffold activity |
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