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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001478 | PDZ domain | SMART | SM00228 | pdz_new | coord: 143..217
e-value: 9.2E-11
score: 51.8 |
| IPR001478 | PDZ domain | PFAM | PF00595 | PDZ | coord: 136..206
e-value: 1.1E-8
score: 35.2 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 135..215
score: 13.451 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 128..219
e-value: 1.3E-22
score: 81.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..58 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 32..48 |
| None | No IPR available | CDD | cd00992 | PDZ_signaling | coord: 134..212
e-value: 1.64938E-11
score: 57.5767 |
| IPR017379 | PDZ domain-containing protein GIPC1/2/3 | PANTHER | PTHR12259 | RGS-GAIP INTERACTING PROTEIN GIPC | coord: 39..329 |
| IPR036034 | PDZ superfamily | SUPERFAMILY | 50156 | PDZ domain-like | coord: 106..216 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11419 ID=Tk11419|Name=Tk11419|organism=Tigriopus kingsejongensis|type=polypeptide|length=355bp
MFGKKNRRSHNPDPPLPPSDRGEPDGGNGATQPDRSEPTPSGPPMRQSSQ
EDPPDIRPKLTFHCQQAHGSPTGIISGFTNVKELYLKIATCYDIEPSQIL
FCTLNTHKIDMKMLLGGQIGLDDFIFAHIKGQAKEIELQKSQEALGLTIT
DNGAGFAFIKRIKEGSVISNCPHIKVGDHIEKLNGKQLVGCRHFEVAKAL
KEIPKESTFVLRLVEPLKPWAEIGPRSNKTGSKSVKNGMKTLRLRANEAA
TIEDVDDLKTAAQEKINLLLENFMGINDEELASQIYDLGITQSNTMDFAE
AIDNSDLEMFGFTDSFIFELWGAITDVKSGRGSTTRANGDFNSNALSTLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0005515 | protein binding |
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