Tk11431, Tk11431 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11431
Unique NameTk11431
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length609
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 74..254
e-value: 1.4E-15
score: 67.7
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 90..249
e-value: 9.7E-18
score: 64.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 61..250
e-value: 3.8E-47
score: 162.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..321
NoneNo IPR availablePANTHERPTHR13620:SF0EXONUCLEASE 3'-5' DOMAIN-CONTAINING PROTEIN 2coord: 78..546
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 78..546
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..609
NoneNo IPR availableCDDcd06141WRN_exocoord: 77..250
e-value: 1.04861E-49
score: 168.141
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 83..250

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold222_size251774-snap-gene-0.18-mRNA-1maker-scaffold222_size251774-snap-gene-0.18-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11431 ID=Tk11431|Name=Tk11431|organism=Tigriopus kingsejongensis|type=polypeptide|length=609bp
MSPLVPGSSSATQLLWGSLALLTGVAATWWLRTRQRRRTYLSMKARLWGQ
LERQLYLSATPNASADRVGHACRVTLVQTADEWEAVSPEVWSHVTAHPLL
GLDCEWLSARQKGQGASRVALLQLGLSHGHCVLVRLHRLERVPDSLSALL
AAPECLKLGVGVLNDAQKLKRDYGVVVQGAVDLRGPARELRPQLRRLGLA
GLAQAFLGVTMDKDWRISASNWEADVLSPRQVTYAANDALVAVNVALVML
LEGLEGSGQDVSGLPDLCRPDQIDAAFQLFRDCPWRDGAPQGPQPERSPP
PQPDMPTRLARAKDPAQKMSTRKTPLYHNARLLAPDGQPLCVCDTKKAAW
YVKKGLATQISEEPFTVQLLFEPSGRPEGEAGEYYLTTKENVCVVCGDSH
SYVRKYIVPHEYRKHFPEIMRDHQSHDILLMCVQCHQKSNLFDFGLRHQL
ATECNAPIGTEEDIKVREDFDLKKVRSAARALEKHNQDGKQLIPPHRVVE
LEKIMQDYYQVTDVNQAVLARGSNLEATILNSNYCPHGKKVVDHFVETCG
LIPLEKRWRHHFLNTMKPKYLPPLWSVDHQQERLDIKATEKRINMDDYRT
ATLGWAKVE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:00084083'-5' exonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
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