Tk11520, Tk11520 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11520
Unique NameTk11520
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length244
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 49..225
e-value: 0.0013
score: 28.0
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 76..225
e-value: 1.0E-4
score: 22.9
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 65..225
score: 13.645
IPR016186C-type lectin-like/link domain superfamilyGENE3D3.10.100.10coord: 38..225
e-value: 8.5E-17
score: 63.3
NoneNo IPR availablePANTHERPTHR21407:SF5C-TYPE LECTIN 27KD, ISOFORM Acoord: 30..242
NoneNo IPR availablePANTHERPTHR21407FAMILY NOT NAMEDcoord: 30..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..244
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableCDDcd00037CLECTcoord: 76..225
e-value: 1.46304E-10
score: 54.9333
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..23
score: 0.54
NoneNo IPR availableSIGNALP_GRAM_NEGATIVESignalP-noTMSignalP-noTMcoord: 1..23
score: 0.598
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.773
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 197..224
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 196..226
coord: 48..147

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold33_size549341-snap-gene-0.21-mRNA-1maker-scaffold33_size549341-snap-gene-0.21-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11520 ID=Tk11520|Name=Tk11520|organism=Tigriopus kingsejongensis|type=polypeptide|length=244bp
MSRIGILVSICLWYLIGPSVSQEATTLTPEATTEDTSGRLLSLPMADKCA
NRPVHFTHDGQNYFYSGKVTEYEDMKLNWLDARNICREHCMDLVSLESPS
EDTMINEYITENDIAYIWTSGRLCNFKGCDREDLQPTSVNGWFWSGSGVK
MAPTDKNPPGWTYQPWSFTGHKTKLEGKDVSQPDNAEFDINQSVEACMGI
LNDVYEDGIKWHDIACYHTKPFVCEDSEQLLEYARASFPEVNIV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link_sf
IPR018378C-type_lectin_CS
IPR016187CTDL_fold
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