Tk11521, Tk11521 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11521
Unique NameTk11521
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length788
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 578..659
e-value: 1.2E-35
score: 134.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 563..659
e-value: 2.0E-29
score: 102.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 548..698
score: 23.336
IPR001650Helicase, C-terminalCDDcd00079HELICccoord: 567..667
e-value: 1.79876E-37
score: 134.288
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 315..532
e-value: 7.2E-64
score: 228.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 327..517
score: 31.735
NoneNo IPR availableGENE3D3.40.50.300coord: 297..518
e-value: 2.0E-79
score: 268.1
NoneNo IPR availableGENE3D3.40.50.300coord: 519..703
e-value: 4.5E-58
score: 197.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 700..788
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 298..778
NoneNo IPR availablePANTHERPTHR24031:SF332ATP-DEPENDENT RNA HELICASE DDX3Ycoord: 298..778
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 201..297
NoneNo IPR availablePANTHERPTHR24031:SF332ATP-DEPENDENT RNA HELICASE DDX3Ycoord: 201..297
NoneNo IPR availableCDDcd00268DEADccoord: 298..518
e-value: 8.03649E-100
score: 305.178
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 320..505
e-value: 8.1E-51
score: 172.2
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 459..467
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 270..298
score: 9.33
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 296..324
score: 9.929
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 382..677

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold33_size549341-snap-gene-0.23-mRNA-1maker-scaffold33_size549341-snap-gene-0.23-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11521 ID=Tk11521|Name=Tk11521|organism=Tigriopus kingsejongensis|type=polypeptide|length=788bp
MNSGSLQNGGGRLEHSEGVLSSDNSIVHSGDGNNGGRGGPSGGSTKSSYV
PPHLRGGRGRGGGGGGAPEEGEGRGGARGGGGRQWSDDRRGGGGGGGGAG
FGDRGGEAVATSLLLSLFVLEHGQPLQLALGEGAAGFIEREXXXXGGGSG
GDRGGSNRWSTTGGGGGGRGGGFGGGGGGGRSWGNDDRWGGGGGGGGGGG
RGGSRGYDSRGSNGNSGGGNPDDWLSLLPRNERLETELFGTGQAPSGINF
DRYEDIPVEATGGNVPAGIEDFSQVELTEIIAKNIELANYTKPTPVQFSQ
VELTEIIAKNIELANYTKPTPVQKNAIPVILGGRDLMACAQTGSGKTAAF
LVPILNRLLLAGPVATGQSGGGYSNRRKQFPLALVLAPTRELATQIFDES
RKFSYRSRARPCVVYGGANVGDQMRDLDRGCHLLVATPGRLVDMLERGKI
SLEYCRFLVLDEADRMLDMGFEPQIRRIVEGDNMPRTGDRQTLMFSATFP
KEIQMLARDFLHDYIFLAVGRVGSTSENITQKIVWVEDHQKKSFLLDLLD
AAGLNTGESGAEDASLTLVFVETKKGADYLDEFLFKSGFPVTSIHGDRTQ
REREDALRCFRNGTNPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVH
RIGRTGRMGNLGLATSFFNDKNRNLVKELVELITESNQELPPWLESLAME
SRSFGGGNPRRGRGGRSSNFTSRDYRMDRGGGGGGGGGGASRGSRSGGYG
GGGGGGGRGWSGPPGASSDYGGNYGGGGGGSSVDWWGN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
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