Tk11536, Tk11536 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11536
Unique NameTk11536
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length566
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 538..560
e-value: 0.0014
score: 27.9
coord: 510..532
e-value: 0.019
score: 24.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 540..560
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 512..532
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 510..537
score: 15.085
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 538..560
score: 12.258
NoneNo IPR availableGENE3D3.30.160.60coord: 535..562
e-value: 5.2E-13
score: 50.5
NoneNo IPR availableGENE3D3.30.160.60coord: 438..534
e-value: 1.4E-9
score: 40.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..506
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..502
NoneNo IPR availablePANTHERPTHR24390FAMILY NOT NAMEDcoord: 473..562
NoneNo IPR availablePANTHERPTHR24390:SF62ZINC FINGER PROTEIN 865coord: 473..562
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 510..560

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold33_size549341-processed-gene-1.12-mRNA-1snap_masked-scaffold33_size549341-processed-gene-1.12-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11536 ID=Tk11536|Name=Tk11536|organism=Tigriopus kingsejongensis|type=polypeptide|length=566bp
MTSGLAAPTPPKHTAPHEQTNLKKVSSAMLEATLVTTTVKFGSQPPANVK
TEVVSPQPQASVSSFSQGGLVSPVPMGSLLHWDCDQYPDSATKFSPIKLE
PSDSLDGMGLSQNSTSEFAELKPMTFDYGITTLTGLDPVLANSSNNNNKT
MVNMNSSSNSSNNNNHHHHHHHHAQQHHHSNNPTAVSTGSSSSSLHNHNT
GSSTVVGSTSRTAPTSSSNHHYPTSSSADVTSTATSSPPGITKLETLDFT
ASQDAFDDLASIVGISMGADSTVPTMESDLDLDAWIENTAQNIKPLMPDG
SLDNMMSGPRHCVSSNTLTVSSQSYLQMSQSSPSSTLQSLLQGNLTPHPP
SAATKVTQLQQREDGHPSSGGAPPPYSILQTRLQHGSLSGPLQPPQNTHS
NIVKVDSTFDLMKLTDQGGNGGGGGHPYLTSNFSDTLPHSTQTLLNHVST
SADQSLHRRLGELSGLAKMKAKQNKIRQKLGLNGVNGVPTGSSSSSGVGS
PGDQSKKMMHHCQICNRGFLNKSNIKVHLRTHTGEKPFKCEHCSKAFRQK
AHLLKHMSIHKRISRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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