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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR013657 | UAA transporter | PFAM | PF08449 | UAA | coord: 176..474
e-value: 8.7E-68
score: 228.6 |
| None | No IPR available | PANTHER | PTHR10778 | SOLUTE CARRIER FAMILY 35 MEMBER B | coord: 175..490 |
| None | No IPR available | PANTHER | PTHR10778:SF13 | ADENOSINE 3'-PHOSPHO 5'-PHOSPHOSULFATE TRANSPORTER 1 | coord: 175..490 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 87..97 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 368..388 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 300..318 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 457..475 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 20..44 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 452..456 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 428..451 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 319..329 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 348..367 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 120..173 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 422..427 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 64..86 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 389..399 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 476..493 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 45..63 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 98..119 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 400..421 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..19 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 237..299 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 174..193 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 330..347 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 194..216 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 217..236 |
| None | No IPR available | TMHMM | TMhelix | | coord: 329..348 |
| None | No IPR available | TMHMM | TMhelix | | coord: 369..388 |
| None | No IPR available | TMHMM | TMhelix | | coord: 300..319 |
| None | No IPR available | TMHMM | TMhelix | | coord: 217..236 |
| None | No IPR available | TMHMM | TMhelix | | coord: 453..475 |
| None | No IPR available | TMHMM | TMhelix | | coord: 172..194 |
| None | No IPR available | TMHMM | TMhelix | | coord: 97..119 |
| None | No IPR available | TMHMM | TMhelix | | coord: 65..87 |
| None | No IPR available | TMHMM | TMhelix | | coord: 427..449 |
| None | No IPR available | TMHMM | TMhelix | | coord: 398..420 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11586 ID=Tk11586|Name=Tk11586|organism=Tigriopus kingsejongensis|type=polypeptide|length=493bp
MSSSSKSRSSEGRASGGSSPALGSLVWLTGVRLAPTRLPFAIVLTLRNLW
RHLKMTPSPKSQDVALLALVFGTAGGIYLLMLSLMILLPDGGSSPHWLMS
LGLNLVGYSIVFLPGYLAIRYVQSTNFMDIGPTCMQPIVKLFVYGSEETI
DDAIDLETDQKSPKKVKSEWQNGVTLAICIVGLQVSYLTWGVLQEKIMTK
QYVDTTGNVGQFKDSQFLVFVNRILAFGIALLYVTLSRQPRHRAPLFKYS
FCSLSNILSSWCQYEALKFVSFPTQVLAKASKIIPVMIMGKIVSNRKYEF
YEYIVAVMISLGMVMFLFGSQEDKKADSSTTISGVFLLVGYMASDSFTSN
WQNELFSTYKMTSMQMMCGVNLFSCLLTSASLIQQGAFYNSLVFMSQYPV
FTFDCIVLSVCSAVGQLFIYYTISQFGAVVFIIIMTLRQAMAILLSCLIY
QHAISISGILGVLVVFGAMFLKIYCGQRLKKMKQAQVAQTTKN back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013657 | UAA |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
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