Tk11597, Tk11597 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11597
Unique NameTk11597
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length635
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000175Sodium:neurotransmitter symporterPRINTSPR00176NANEUSMPORTcoord: 87..113
score: 43.72
coord: 472..492
score: 40.28
coord: 516..536
score: 23.81
coord: 393..412
score: 49.75
coord: 14..35
score: 63.11
coord: 43..62
score: 46.07
IPR000175Sodium:neurotransmitter symporterPFAMPF00209SNFcoord: 182..577
e-value: 6.1E-92
score: 308.9
coord: 6..146
e-value: 2.8E-54
score: 184.6
IPR000175Sodium:neurotransmitter symporterPANTHERPTHR11616SODIUM/CHLORIDE DEPENDENT TRANSPORTERcoord: 4..579
IPR000175Sodium:neurotransmitter symporterPROSITEPS50267NA_NEUROTRAN_SYMP_3coord: 5..580
score: 78.177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 597..635
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 116..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 513..536
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 462..472
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 257..264
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 347..371
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 314..335
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 577..635
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 286..313
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 438..461
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 427..437
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 537..555
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 401..426
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 336..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 556..576
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 265..285
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 372..400
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 473..492
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 493..512
NoneNo IPR availableTMHMMTMhelixcoord: 471..493
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 439..461
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 314..336
NoneNo IPR availableTMHMMTMhelixcoord: 551..573
NoneNo IPR availableTMHMMTMhelixcoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 349..371
NoneNo IPR availableTMHMMTMhelixcoord: 405..427
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 514..536
NoneNo IPR availableTMHMMTMhelixcoord: 265..287
NoneNo IPR availableTMHMMTMhelixcoord: 15..33
IPR037272Sodium:neurotransmitter symporter superfamilySUPERFAMILY161070SNF-likecoord: 6..136
coord: 205..576

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold297_size217559-snap-gene-1.20-mRNA-1maker-scaffold297_size217559-snap-gene-1.20-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11597 ID=Tk11597|Name=Tk11597|organism=Tigriopus kingsejongensis|type=polypeptide|length=635bp
MASNERESWGNHCEFFLTSLGLAVGLGNVWRFPYVCYTNGAGSFLIPYII
MLLVVGIPSLFVESSIGQYGRTGANKVFGRMVPIFKGLGYGMLFVRFLVN
VYYVVICAWALFYLFAGFTSQLPWAGCYNPWNTYNCYDIGEAEVCNPGLE
YEDWNMTFYQKECVNKTVYCEAHDFQQYNESSDQCVNNAGIGIDFVVVVQ
DNSISPAEDYLNGRVLKLNKDSTVGDQYDWTDFGTLQWELVLCLLLAWIL
VILSLIKGLQSLGKAAYVVTLSPYFVLTALIIYTLQLEGSGNGIRYYLAP
EWEKLADVQIWSKAASQILFSLSVGFGSQLVLSSYNSFKNNTQRDSILIA
ICNSLTSIYAGFVVFSILGYLEFKTKSPIDKAGSPSKKGILEMAPPPLWS
FLFFFMLINLALSSICGGVQTFIAFILDEKPEWNKYRIHIVVIVCTAYFL
LGLPMCMNGGIHLFTIFDKRTTSSLLFITFLELVIVAWFYGINKFLSNLK
YEMEQRVPKPVEWIWKILLVVVAPVVLFVITILSWINHEDMAYNDYVYPD
IVQGFGWAMEMIPLGITILYPLWTLYKSRSKDGKLVDLLFKPTDSWYNTD
RGLEPMDDEAKDMSISRKSRGSSDGETNSAYDKSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000175Na/ntran_symport
IPR037272SNS_sf
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006836neurotransmitter transport
Vocabulary: Molecular Function
TermDefinition
GO:0005328neurotransmitter:sodium symporter activity
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