|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001565 | Synaptotagmin | PRINTS | PR00399 | SYNAPTOTAGMN | coord: 319..332
score: 28.36
coord: 304..319
score: 23.71
coord: 397..407
score: 39.57
coord: 377..392
score: 22.79 |
| IPR000008 | C2 domain | SMART | SM00239 | C2_3c | coord: 316..421
e-value: 1.1E-16
score: 71.4
coord: 471..576
e-value: 8.1E-14
score: 61.9 |
| IPR000008 | C2 domain | PFAM | PF00168 | C2 | coord: 317..424
e-value: 7.8E-20
score: 71.0
coord: 470..578
e-value: 1.3E-18
score: 67.0 |
| IPR000008 | C2 domain | PROSITE | PS50004 | C2 | coord: 317..406
score: 17.664 |
| IPR000008 | C2 domain | PROSITE | PS50004 | C2 | coord: 471..561
score: 15.237 |
| IPR035892 | C2 domain superfamily | GENE3D | 2.60.40.150 | | coord: 434..610
e-value: 6.4E-35
score: 122.1 |
| IPR035892 | C2 domain superfamily | GENE3D | 2.60.40.150 | | coord: 294..433
e-value: 5.7E-40
score: 138.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 219..253 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 219..281 |
| None | No IPR available | PANTHER | PTHR10024 | SYNAPTOTAGMIN | coord: 271..606 |
| None | No IPR available | PANTHER | PTHR10024:SF245 | BITESIZE, ISOFORM I | coord: 271..606 |
| None | No IPR available | CDD | cd08521 | C2A_SLP | coord: 302..424
e-value: 1.27199E-54
score: 183.225 |
| None | No IPR available | CDD | cd04020 | C2B_SLP_1-2-3-4 | coord: 441..605
e-value: 2.70457E-66
score: 217.576 |
| None | No IPR available | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 293..428 |
| None | No IPR available | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 437..578 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11672 ID=Tk11672|Name=Tk11672|organism=Tigriopus kingsejongensis|type=polypeptide|length=1014bp
MLSDEFRKAETTPYYSTFTNNLQQERLAALQPSKDADEPHESWSHNLSEY
VSNFYRVILYRVGTACLPCFEIASAFNLFGLFRTKGRAEDDSLLSRSSRS
STSQSIHLMENGDLSGSPSLDQLVAAKEPKKRTRGLKSPTGSLLNIHLGR
PSTPVESDARKPKAKGRAKVDLGTKGRVASEVLLRNNPGLVGKLDENNKP
FVKEPRSHSLTNTNRIKLKNDIASEMSSKSGSPSPVITRDFRESSVNSRS
SLETNDGEIRDERYPSPFNKSGSLSSLGSRSESMMSVYSQEGGRYGSVVV
RGDVEFGMLYSFSSGCLEMAIKQCRDLASVDTKRNRSDPYVKVYLLPDKT
KGGKRKTKVKKHTLNPVFDEILKFQMPLSEVERRTMWLTVWHSDMFGRND
FLGEVMMPMAGQALDDPSPKWYSLQDRTEAPGGEDEAGAYRGEIIVALKF
VPLPSDLKSKSSRHARKTRGKLMVLIKEAKNLVPLKGSTNIDPFCKCYLL
PERNKSGKQKTSVCRRSLNPRWEHTVTWDQVSLAELADRSLEVSIWDHDR
LGQNEMLGGVRFNLGSGKHQSKPSTWMDSAGKEVTLWQQMLDRTNFWVEG
AVNLRPGTIDTDSVIGISDDPVLKLRYPRVDSGSIAVPTANAPTNHTGQL
VAAIAAFDGQRSPTVALTRVFPAIGRSSTDKDARDPLVLPGPPVEVHAFG
VGDDGQVDLAEDGRDVAVLGASAPARYCGRASNQVLVGIRQADGDDVGLE
LHAVDHLEESNVVLVAELVKVHVGNHASDASIEMPVGLAAIQDVVLADAD
QEIAGRDVLDAMGCGDHPCVGEQGRAAFVAELAVLVLSQRHLPRPFAVTG
HATAHDAPLPDETSAADVLVVRSGIEGVELLLSIAPSIVGEAIGGLGVDC
HILVVLAEKLRGELAAVCDPCPAIGTHLDAALVLVILGHAALQPIVGGEL
AAIVIPSELAHLFKVTGTHPVPACAIGALQNRDQSVAVLFGGNLGQMTQT
ADALVLGLRPGQVV back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
|
