|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | SMART | SM00175 | rab_sub_5 | coord: 9..197
e-value: 1.8E-5
score: -41.5 |
| None | No IPR available | SMART | SM00173 | ras_sub_4 | coord: 26..197
e-value: 0.0058
score: -61.9 |
| None | No IPR available | SMART | SM00174 | rho_sub_3 | coord: 29..197
e-value: 3.5E-35
score: 132.9 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 22..201
e-value: 9.5E-35
score: 121.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 497..512 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 494..519 |
| None | No IPR available | PANTHER | PTHR24072 | RHO FAMILY GTPASE | coord: 41..195 |
| None | No IPR available | PANTHER | PTHR24072:SF146 | SUBFAMILY NOT NAMED | coord: 41..195 |
| None | No IPR available | CDD | cd00157 | Rho | coord: 41..193
e-value: 2.23317E-51
score: 170.802 |
| IPR001806 | Small GTPase superfamily | PFAM | PF00071 | Ras | coord: 40..189
e-value: 1.0E-23
score: 83.6 |
| IPR003578 | Small GTPase superfamily, Rho type | PROSITE | PS51420 | RHO | coord: 1..191
score: 15.952 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 39..176 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11767 ID=Tk11767|Name=Tk11767|organism=Tigriopus kingsejongensis|type=polypeptide|length=519bp
MATPEAQMSILSRIETKPLRTNERVMTTVVKGLDFGVNKMDYIPTSFDKV
LATQEVNKHKVDLVLWDTSGSPAYDSVRSLSYPDADVFLLCYKIADPISL
QNVKTKWMPEIRRHDHGGHGAVPIILCGCQSDLRSDAGVLEQLSKVGRGP
VSQEQGLGVCCEVGAVNYIETSSAMAYESRSEVHEAFELCALAFIKSGRG
DLPRSPSSASSSTHKHLLNNSFGSQSDLSLPKKSGSACSSLKKRAQNISF
SSSENEMAINSTVPPILEDDVFPGVSSQSRSPRLSHGDKARIRSKSQHRV
SMAPTRNELAFMVEEEPAPPPLFTSTTNRSSCTAINIHSTTSQSPVSPAQ
AQVRANGLSRRTSFLAQTKPHGALSVESPSSPLGSVSSSSCYDLKSPVMS
THSVPTSSYEIKPNGLKVLGFESLKSHASTGSQGSTGSKTSTGSSYGSTS
TAAAHLRKRGSLMPKDPSVPDTEDPELLRNLQYVSPKAGVYRPINSNGTA
AGHNSSGNGGKGKKNCTIM back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005622 | intracellular |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
|
