Tk11818, Tk11818 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11818
Unique NameTk11818
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length374
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 91..114
score: 26.54
coord: 288..312
score: 37.47
coord: 9..31
score: 40.16
coord: 326..352
score: 36.87
coord: 44..65
score: 24.0
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 1..344
e-value: 3.6E-55
score: 187.0
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 15..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..281
NoneNo IPR availablePANTHERPTHR242475-HYDROXYTRYPTAMINE RECEPTORcoord: 1..368
NoneNo IPR availablePANTHERPTHR24247:SF1175-HYDROXYTRYPTAMINE RECEPTOR 2A-RELATEDcoord: 1..368
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 328..347
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 317..327
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..291
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 292..316
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 348..374
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..44
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 283..369
coord: 1..125
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 325..347
NoneNo IPR availableTMHMMTMhelixcoord: 293..315
NoneNo IPR availableTMHMMTMhelixcoord: 4..25
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 1..344
score: 30.863

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold423_size175618-snap-gene-0.11-mRNA-1maker-scaffold423_size175618-snap-gene-0.11-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11818 ID=Tk11818|Name=Tk11818|organism=Tigriopus kingsejongensis|type=polypeptide|length=374bp
LCEIWTMSDVLCCTASILHLLAIAVDRYWAVTQVHYIHSRTIRTVGGMIA
AIWLTSVSVSLAPLFGWKDNNFETRVNVEKTCMVSQDVSYQVFATMATFY
VPLVVILLLYWRIFLTARNRLRTRQAQKAQLPGNVKKSHTIGGKKAQNGH
NCEAKMSAKNRVKTILLRRSKVTEDLPVEDVSEETAFNQHHPESAHNNRH
SDPPSLRNGDETPPSKGQHSLSCPKNSPTNSVVSQGCQTEQTTSKAKPLS
SLKAARRHKGLRGTNSSLARSRKEKKHVSLEAKRERKAAKTLAIVTGAFI
VCWLPFFILALLMPIFKNHEFNGRVVSFFLWLGYFNSTLNPIIYTVFSPE
FRQAFQRILFGKATTQNHRPRHLQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Add to Basket