Tk11830, Tk11830 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11830
Unique NameTk11830
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length665
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 77..147
e-value: 3.8E-12
score: 56.3
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 79..147
e-value: 5.9E-15
score: 54.7
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 77..147
score: 14.534
IPR006636Heat shock chaperonin-bindingSMARTSM00727CBMcoord: 459..495
e-value: 1.2
score: 15.9
coord: 211..248
e-value: 4.6E-6
score: 36.1
coord: 408..455
e-value: 4.7E-7
score: 39.4
coord: 249..280
e-value: 0.24
score: 20.5
NoneNo IPR availableGENE3D1.10.8.10coord: 578..607
e-value: 1.3E-10
score: 42.8
NoneNo IPR availableGENE3D3.10.20.90coord: 62..152
e-value: 1.3E-18
score: 68.5
NoneNo IPR availableGENE3D1.10.260.100coord: 243..300
e-value: 1.0E-7
score: 33.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..550
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..561
IPR028799Ubiquilin-1PANTHERPTHR10677:SF16UBIQUILIN-1coord: 51..609
IPR015496UbiquilinPANTHERPTHR10677UBIQUILINcoord: 51..609
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 65..147
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 573..607

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold611_size124749-snap-gene-0.19-mRNA-1maker-scaffold611_size124749-snap-gene-0.19-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11830 ID=Tk11830|Name=Tk11830|organism=Tigriopus kingsejongensis|type=polypeptide|length=665bp
LATECRQPSPAIAPVDDTKTRSSRSSWPCLRWTPHPLRTRPRMSDQKPQE
AAEAGGNPVDMATAGHDSDDEDQGNLISVHVKTPQSKKTLSVPERSGIVE
FKDLIAREFEAPKDKLCIIFGGKIMKDHETLASHAIGDGMTVHLVIKSGN
TAGGSVNHGSPASAPQSPANPSSSPFGLGGMGGIPGMSNLGMGSANFMEM
QQRMQREMMGNPEMLRQLLDSPLTQSLMSNPEILRSIMQSNPQMQQLMER
NPEITHMLNNPDIIRQTMEFARNPAMMQELMRNQDRAMSNLESIPGGQSA
LQRMYRDIQEPMLNAAQDQFGSNPFQALGGGGNATAQAGNTAPSTGENAA
PMPNPWGGPSGPNNSQANPSGNPGTPNASSAPTAPGLTGSNLFSSPGMQS
LMQQMTENPQLMQNMLNAPYTQSMMSSLSQNPDMAANIISSNPLFAGNPQ
LQEQMRNMMPAMMQQMQNPAVQNLVGNPDAMAALTQINQGLQRLHSAAPD
MYTNLGMPSMVPGMGMGGNAATTAQPTSTTSTGSATSPATSNTAGSGPGL
GPNNGQPGGEAFASLMNQMVTNMASQGLNNPPEERFQSQLEQLGNMGFVD
RQANIQAHCSGSNSPMKVILDMGSGMGSIGLGSSEASGFLAISRLIFSSF
RRSEYLLGLVKGLGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR006636STI1_HS-bd
IPR028799UBQLN1
IPR015496Ubiquilin
IPR029071Ubiquitin-like_domsf
IPR009060UBA-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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