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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1095..1150 |
| None | No IPR available | COILS | Coil | Coil | coord: 1317..1337 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1920..1942 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1881..1965 |
| None | No IPR available | PANTHER | PTHR14222:SF1 | CONDENSIN-2 COMPLEX SUBUNIT D3 | coord: 11..1271 |
| IPR011989 | Armadillo-like helical | GENE3D | 1.25.10.10 | | coord: 295..511
e-value: 1.2E-7
score: 32.8 |
| IPR011989 | Armadillo-like helical | GENE3D | 1.25.10.10 | | coord: 781..914
e-value: 3.9E-8
score: 35.1 |
| IPR032682 | Condensin complex subunit 1, C-terminal | PFAM | PF12717 | Cnd1 | coord: 823..994
e-value: 8.1E-19
score: 68.1 |
| IPR026971 | Condensin subunit 1/Condensin-2 complex subunit D3 | PANTHER | PTHR14222 | CONDENSIN | coord: 11..1271 |
| IPR016024 | Armadillo-type fold | SUPERFAMILY | 48371 | ARM repeat | coord: 300..505
coord: 710..738
coord: 539..646
coord: 122..219
coord: 782..1109 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk11937 ID=Tk11937|Name=Tk11937|organism=Tigriopus kingsejongensis|type=polypeptide|length=1965bp
LSEAEVSELANALNGVIYDFHVFLDHHPLKRSLESLELTVSELVELTHLE
TTIANLDFGHKNRRSDLSALAFNAYCALERICHPLHGDVKRSLLLIFKFL
LPAILMTHRGSSEITPKGLTIIREHSLHFVKHLVRRMGEETHSPLEVLVQ
HMALQVPDKAEFRSKTSHAIVSLMRELPSGQVFNRMVRWFFAWAHSEKVA
HRQFSLEVMGRLIQENERGQEPVGASPEKVPILTPDAAQEPSETLDAAKE
PPKTLDIETGLISENIVHPLPEASQEIRVTEPSEATVSSQTVKKRSYLGD
LVSHKFIFGVIFSRCRDVSATVRAKALQTLADITAANNPIIVTVIQSMMD
QSAQIGSQPNAALENMVDFVELLEDESKDLGAINPLPSAACFTEFLRKRA
LDESVYVRKNSIQVIVNILKFSADLLQEDLVSILSEHCRDSSLMVRKLIS
GALTDLLKTYPTNDMVIRHWVDGLFPLILDVEQKAAEKVLESVWECLFGN
LVKYSASGKNVHFLPWKILQSSEELKMTKYLSRACGIWAKEGQLKANVID
ILKTHIHTENNDLTWLILSLISGHVTIPDPHFVMEYFNTSIHTPEGVGLY
TLLQVLRVLFASVIRLSQNEQTMLQKDLVLLVKRFAIPPELIPTAVDIAT
VVSSIEAGGGSDSSSLKAYQTKVDGWTVEIIEAIDHDLSEKILNPSGEDV
EDVQMMRKIFTLGELAQISPQKINKRLFLLMQSIIFQQGTKHRRPKKGVG
TQSDGQSQSQAPVAVPSSQTQSSQPPPCAFQPTTRLQALAIVTLAKMCLQ
HEDMAKKIIPAFGQILDTSNDNAVKNNIMYALTDMCVRYASLVDPLIPQI
TACLKDDSLVVRRSTLITLIHLLQEDYLKMSGRGAFFFRIMQTLNDDSDE
MRHLTTFYLQQRLIKRKPKVMFQHFTEALFHFNEYESHETYNKFNISERE
KRLFSMRGPEYRHDRMKLYKFMLENMSDEQRFQTTYRLCKDILGGAVEGQ
VILGLESFDLLQDAFACLSCEEIKLASLKSKVDEDEGQPSSQTDDDMSGA
IQSALKKNLISQVVKKNVIENIIPIIISLKHKLEELESGLLDDLMNYLRE
LMKDYKNEVKDMLAADKQLATEIESDLKKWEEEQKKIEEARREAEAQDKS
PSRRDLLLRAVVESAVNVFQEKQKEKERRKEAGEIIDDDSISSQGDLMDK
FLTKNVGKPGSNPANISTMLSPRLVIQDVMSPLQASSSKSMREKSSASPR
SVSRNSGERSPTTAKRKLTESFNDMVVAEESILMTEADQENLASEVLSEL
HAHQKSSANLTTTVPSLAEINRELEVAVNKSKRLQRKTPKGRVSVSDKEN
ITDDESQTLASALEDSICEAEPSPSLEPLEQELEAIAPDSPAKDPISSQS
PIPPESVVCEPLPETRQGRKRKLTDLPGAEASPSQPTQKKAQSKASQDSR
GIKESEGLLPPSEVTNPEAIAAPVLSEATAPPEAEEEAPPPASDKKEADS
LVAQENDAPSEADALLPSPETKDTDAEETKESKPDEATETSERSRPSLGG
STDDAVPEPRDEAKSKAPLAKSKPMAKRKTRKGRSRTIATQSGRGPVVLI
EPLGKRWKYKGIAATIPRARPASPKPSHQPPVAASPQVGTKRRSARSTAE
VEEVESSPPKRRRIMSPKLQKSPAKSRVTSKMASRLSLVVKAVEMETANT
PERSYGGISRLQKEIKPSRNDEVHQVGNKKKKKRALPLLKPRKRTRGQNQ
RATTSSEDEEVSFNFQPQPPAEKDPEDEISFKLPDPGIVPSRSILSNAAF
RSSRSKEVSFKAPSLNEISSASLTTRRFQLSHKAQEKRRSLASMASEVDP
LRSKAQNVLRAISTPKAKGVSQGDLTFLEQSHDLSAIPILSPPSTRKKRG
TKPQSDPTDESAVSFKFGRTRQDPFEEMLKRDENHRRASNEEAGQDTSLS
RVSPRSRKPNKRYLN back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007076 | mitotic chromosome condensation |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0005488 | binding |
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