Tk11938, Tk11938 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11938
Unique NameTk11938
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length269
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 160..176
score: 25.91
coord: 71..86
score: 33.24
coord: 113..131
score: 59.57
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 69..148
e-value: 1.1E-23
score: 82.9
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 186..219
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 49..185
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 76..160
e-value: 1.4E-29
score: 103.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..269
NoneNo IPR availablePANTHERPTHR10126:SF13TATA BOX-BINDING PROTEIN-LIKE PROTEIN 1coord: 49..185
coord: 186..219
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 66..160

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1303_size49631-snap-gene-0.16-mRNA-1maker-scaffold1303_size49631-snap-gene-0.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11938 ID=Tk11938|Name=Tk11938|organism=Tigriopus kingsejongensis|type=polypeptide|length=269bp
MMHVMEPAGRGAGRLLPAGPDTPSPHHAPPSSGGHSLKDASASSSPTPLE
AEAEEEEEAAAANGPEIDIVINNVVCSFSVRCHLNLRDIALRGVNVEYRR
ENGMVTMKLRHPYTTASIWSSGKITCTGANSEDHAKIAARRYARLLQKLG
FNIRFKNFRVVNVLGTCTLPFAIKITQFSQKYKEASVTVTAPCVRNVQLA
IEHIYPLVHEFQKPKPPKVDPVPPPAAVAAAAQPEGSSNIGAKKSQARSK
GLKRKRGFHSQSDNSEEEW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
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