Tk11965, Tk11965 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11965
Unique NameTk11965
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length322
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 39..116
e-value: 2.7E-7
score: 40.2
coord: 132..206
e-value: 9.7E-16
score: 68.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 133..204
e-value: 6.4E-11
score: 41.8
coord: 40..109
e-value: 8.6E-10
score: 38.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 38..120
score: 12.168
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 131..210
score: 15.153
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 130..207
e-value: 1.1E-17
score: 65.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 38..120
e-value: 4.3E-17
score: 64.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..249
NoneNo IPR availablePANTHERPTHR44297:SF4TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1coord: 39..310
NoneNo IPR availablePANTHERPTHR44297FAMILY NOT NAMEDcoord: 39..310
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 130..236
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 39..122

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold1191_size56271-snap-gene-0.17-mRNA-1maker-scaffold1191_size56271-snap-gene-0.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11965 ID=Tk11965|Name=Tk11965|organism=Tigriopus kingsejongensis|type=polypeptide|length=322bp
LHWAFGTWGCDWACPRASIAHSEARITPWAVVSMSRDGALWIGGLEPYMD
EEYIQSAFVAMGENNILSIKIIKNKFTGEPASYGFVNFESDPAALMAMHR
LNGKIMPNSQPPVRFKLNHNSTRLMPGERDYSVWVGDLTPDVDDYQFYKF
FSARFQTVRSAKVVLDGAGYSKGYGFIRFANEQEQNTALMSMMGVSGLGG
KPIKVSLAVPKWKMEQQAGEKGGSSGPHHHHQYHHSSHSNNTSSGTSITD
NLPASALAMVVSNASGNPNAGAAMVAEAQSKEYAQMWEQYYQQQWEQYAA
WNEYASQYAANPGEEDDGSGYY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
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