Tk11968, Tk11968 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11968
Unique NameTk11968
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length326
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 291..311
NoneNo IPR availableCDDcd02187beta_tubulincoord: 3..309
e-value: 0.0
score: 595.315
IPR002453Beta tubulinPRINTSPR01163BETATUBULINcoord: 153..165
score: 90.86
coord: 89..100
score: 94.76
coord: 42..59
score: 67.97
coord: 213..225
score: 81.23
coord: 231..240
score: 69.77
coord: 246..259
score: 77.59
coord: 109..127
score: 83.97
IPR002453Beta tubulinPANTHERPTHR11588:SF256SUBFAMILY NOT NAMEDcoord: 13..258
IPR002453Beta tubulinPANTHERPTHR11588:SF256SUBFAMILY NOT NAMEDcoord: 259..324
IPR000217TubulinPRINTSPR01161TUBULINcoord: 107..131
score: 67.64
coord: 177..190
score: 79.11
coord: 11..31
score: 68.4
coord: 133..151
score: 79.22
coord: 152..173
score: 54.41
coord: 94..105
score: 76.26
coord: 52..71
score: 65.41
coord: 191..211
score: 69.69
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 259..324
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 13..258
IPR003008Tubulin/FtsZ, GTPase domainSMARTSM00864Tubulin_4coord: 48..245
e-value: 3.6E-70
score: 249.1
IPR003008Tubulin/FtsZ, GTPase domainPFAMPF00091Tubulincoord: 4..212
e-value: 3.8E-69
score: 232.7
IPR023123Tubulin, C-terminalGENE3D1.10.287.600coord: 262..313
e-value: 2.5E-33
score: 115.6
IPR036525Tubulin/FtsZ, GTPase domain superfamilyGENE3D3.40.50.1440coord: 2..261
e-value: 2.1E-121
score: 406.4
IPR036525Tubulin/FtsZ, GTPase domain superfamilySUPERFAMILY52490Tubulin nucleotide-binding domain-likecoord: 2..244
IPR017975Tubulin, conserved sitePROSITEPS00227TUBULINcoord: 141..147
IPR008280Tubulin/FtsZ, C-terminalSUPERFAMILY55307Tubulin C-terminal domain-likecoord: 258..309

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold1191_size56271-processed-gene-0.2-mRNA-1snap_masked-scaffold1191_size56271-processed-gene-0.2-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11968 ID=Tk11968|Name=Tk11968|organism=Tigriopus kingsejongensis|type=polypeptide|length=326bp
MPREIVHLQAGQCGNQIGAKFWEIISDEHGVDPNGYYQGDSDLQMERIEV
YYTEASGGKYVPRCVLVDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGN
NWAKGHYTEGAELVDSVLDVVRREAEACDCLQGFQLTHSLGGGTGSGMGT
LLISKIREEYPDRIMVTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDET
FCIDNEALYDICFRTLKLATPTYGDLNHLVSLTMSGITTCLRFPGQLNAD
LRKLATNMELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
LVSEYQQYQDATAEDEYDEYSEEDEY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002453Beta_tubulin
IPR000217Tubulin
IPR003008Tubulin_FtsZ_GTPase
IPR023123Tubulin_C
IPR036525Tubulin/FtsZ_GTPase_sf
IPR017975Tubulin_CS
IPR008280Tub_FtsZ_C
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0005200structural constituent of cytoskeleton
GO:0003924GTPase activity
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